=>> Building science/py-emmet-core build started at 2026-03-18T18:11:42-04:00 port directory: /usr/ports/science/py-emmet-core package name: py311-emmet-core-0.64.0_1 building for: FreeBSD current-exp-job-01 16.0-CURRENT FreeBSD 16.0-CURRENT 1600012 amd64 maintained by: yuri@FreeBSD.org port version: 0.64.0 port revision: 1 Makefile datestamp: Sep 8 13:34:03 2025 =>> Inspecting /usr/local/poudriere/data/.m/current-exp/ref//usr/ports/science/py-emmet-core for modifications to git checkout... no Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.99.20260303 Host OSVERSION: 1600012 Jail OSVERSION: 1600012 Builder Id: 01 Builder jail path: /usr/local/poudriere/data/.m/current-exp/01 Ref jail path: /usr/local/poudriere/data/.m/current-exp/ref Job Idx: 484 Jail Id (no networking) : 723 Jail Name (no networking): current-exp-job-01 Jail Id (networking) : 725 Jail Name (networking) : current-exp-job-01-n ---Begin Environment--- SHELL=/bin/sh OSVERSION=1600012 UNAME_v=FreeBSD 16.0-CURRENT 1600012 UNAME_r=16.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git POUDRIERE_VERSION=3.4.99.20260303 LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=tmux-256color GID=0 OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 UID=0 PWD=/usr/local/poudriere/data/.m/current-exp/01/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=current-exp OLDPWD=/usr/local/poudriere/data/.m/current-exp/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.99.20260303 PREFIX=/usr/local POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --PORTVERSION-- 0.64.0 --End PORTVERSION-- --PORTREVISION-- 1 --End PORTREVISION-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- SCCACHE_SERVER_UDS="/tmp/sccache-overlay.socket" SCCACHE_CONF="/root/.ccache/sccache/config" SCCACHE_IDLE_TIMEOUT="0" RUSTC_WRAPPER="/overlays/sccache/bin/sccache" PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311 TMPDIR="/tmp" PATH=/ccache/libexec/ccache:/ccache/bin:/wrkdirs/usr/ports/science/py-emmet-core/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-emmet-core/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCACHE_DIR="/root/.ccache" --End CONFIGURE_ENV-- --MAKE_ENV-- SCCACHE_SERVER_UDS="/tmp/sccache-overlay.socket" SCCACHE_CONF="/root/.ccache/sccache/config" SCCACHE_IDLE_TIMEOUT="0" RUSTC_WRAPPER="/overlays/sccache/bin/sccache" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-emmet-core/work-py311 TMPDIR="/tmp" PATH=/ccache/libexec/ccache:/ccache/bin:/wrkdirs/usr/ports/science/py-emmet-core/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-emmet-core/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CCACHE_DIR="/root/.ccache" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd16 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=16.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/emmet-core" EXAMPLESDIR="share/examples/emmet-core" DATADIR="share/emmet-core" WWWDIR="www/emmet-core" ETCDIR="etc/emmet-core" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd16 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/emmet-core DOCSDIR=/usr/local/share/doc/emmet-core EXAMPLESDIR=/usr/local/share/examples/emmet-core WWWDIR=/usr/local/www/emmet-core ETCDIR=/usr/local/etc/emmet-core --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles OVERLAYS+=/overlays/sccache FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### DEFAULT_VERSIONS+= gcc=15 DEFAULT_VERSIONS+= gl=mesa-dri DEFAULT_VERSIONS+= go=1.26 DEFAULT_VERSIONS+= guile=3.0 DEFAULT_VERSIONS+= imagemagick=6 DEFAULT_VERSIONS+= java=25 DEFAULT_VERSIONS+= librsvg2=legacy DEFAULT_VERSIONS+= linux=c7 DEFAULT_VERSIONS+= llvm=21 DEFAULT_VERSIONS+= lua=5.4 DEFAULT_VERSIONS+= mono=5.10 DEFAULT_VERSIONS+= mysql=10.11m DEFAULT_VERSIONS+= ninja=ninja DEFAULT_VERSIONS+= nodejs=current DEFAULT_VERSIONS+= perl5=5.42 DEFAULT_VERSIONS+= pgsql=18 DEFAULT_VERSIONS+= php=8.4 DEFAULT_VERSIONS+= pycryptography=legacy DEFAULT_VERSIONS+= python=3.12 DEFAULT_VERSIONS+= python3=3.12 DEFAULT_VERSIONS+= ruby=3.4 DEFAULT_VERSIONS+= ssl=libressl DEFAULT_VERSIONS+= tcltk=9.0 OPTIONS_UNSET+= WAYLAND OPTIONS_EXCLUDE_aarch64+= MFX SVTAV1 SVTHEVC SVTVP9 OPTIONS_EXCLUDE_armv7+= MFX SVTAV1 SVTHEVC SVTVP9 .ifdef QEMU_EMULATING OPTIONS_EXCLUDE+= IMAGEQUANT LIQ .endif DISABLE_LICENSES= y #### /usr/local/etc/poudriere.d/current-make.conf #### DEFAULT_VERSIONS+= librsvg2=rust DEFAULT_VERSIONS+= pycryptography=rust DEFAULT_VERSIONS+= python=3.12 DEFAULT_VERSIONS+= python3=3.12 DEFAULT_VERSIONS+= ssl=libressl-devel WITH_DEBUG_PORTS= devel/glib20 \ devel/libudev-devd \ devel/libepoll-shim \ x11/libinput \ x11/libXi \ x11/libX11 \ graphics/mesa-dri \ graphics/drm-66-kmod \ graphics/nvidia-drm-66-kmod \ x11/nvidia-driver \ x11-toolkits/gtk40 \ comms/gnuradio \ emulators/qemu-user-static \ emulators/qemu-user-static-devel \ multimedia/mlt7 \ audio/mixxx \ audio/portmidi \ irc/halloy \ net-im/fractal \ www/webkit2-gtk PKG_COMPRESSION_FORMAT= tzst BUILD_ALL_PYTHON_FLAVORS= y #### /usr/local/etc/poudriere.d/current-exp-make.conf #### DEFAULT_VERSIONS+= python=3.11 DEFAULT_VERSIONS+= python3=3.11 DEFAULT_VERSIONS+= ssl=base #DEFAULT_VERSIONS+= tcltk=8.6 BUILD_ALL_PYTHON_FLAVORS= y WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache NO_CCACHE_DEPEND=1 CCACHE_WRAPPER_PATH= /ccache/libexec/ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- times start [shell] (user/sys/real): 0m0.036s 0m0.012s 7m50.000s times start [child] (user/sys/real): 0m0.195s 0m0.664s 7m50.000s =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-emmet-core-0.64.0_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.6.2_1.pkg [current-exp-job-01] Installing pkg-2.6.2_1... [current-exp-job-01] Extracting pkg-2.6.2_1: .......... done ===> py311-emmet-core-0.64.0_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-emmet-core-0.64.0_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 => emmet-core-0.64.0.tar.gz doesn't seem to exist in /portdistfiles. => Attempting to fetch https://files.pythonhosted.org/packages/source/e/emmet-core/emmet-core-0.64.0.tar.gz emmet-core-0.64.0.tar.gz 146 kB 2120 kBps 00s ===> Fetching all distfiles required by py311-emmet-core-0.64.0_1 for building =========================================================================== =================================================== ===== env: FETCH_REGET=0 NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-emmet-core-0.64.0_1 for building => SHA256 Checksum OK for emmet-core-0.64.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Fetching all distfiles required by py311-emmet-core-0.64.0_1 for building ===> Extracting for py311-emmet-core-0.64.0_1 => SHA256 Checksum OK for emmet-core-0.64.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Patching for py311-emmet-core-0.64.0_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-emmet-core-0.64.0_1 depends on package: py311-setuptools_scm7>0 - not found ===> Installing existing package /packages/All/py311-setuptools_scm7-7.1.0.pkg [current-exp-job-01] Installing py311-setuptools_scm7-7.1.0... [current-exp-job-01] `-- Installing py311-packaging-26.0... [current-exp-job-01] | `-- Installing python311-3.11.15... [current-exp-job-01] | | `-- Installing gettext-runtime-0.26... [current-exp-job-01] | | `-- Installing indexinfo-0.3.1_1... [current-exp-job-01] | | `-- Extracting indexinfo-0.3.1_1: . done [current-exp-job-01] | | `-- Extracting gettext-runtime-0.26: .......... done [current-exp-job-01] | | `-- Installing libffi-3.5.1... [current-exp-job-01] | | `-- Extracting libffi-3.5.1: .......... done [current-exp-job-01] | | `-- Installing mpdecimal-4.0.1... [current-exp-job-01] | | `-- Extracting mpdecimal-4.0.1: .......... done [current-exp-job-01] | | `-- Installing readline-8.3.3... [current-exp-job-01] | | `-- Extracting readline-8.3.3: .......... done [current-exp-job-01] | `-- Extracting python311-3.11.15: .......... done [current-exp-job-01] `-- Extracting py311-packaging-26.0: .......... done [current-exp-job-01] `-- Installing py311-typing-extensions-4.15.0... [current-exp-job-01] `-- Extracting py311-typing-extensions-4.15.0: ....... done [current-exp-job-01] Extracting py311-setuptools_scm7-7.1.0: .......... done ===== Message from python311-3.11.15: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-emmet-core-0.64.0_1 depends on package: py311-setuptools_scm7>0 - found ===> Returning to build of py311-emmet-core-0.64.0_1 ===> py311-emmet-core-0.64.0_1 depends on package: py311-setuptools>=63.1.0 - not found ===> Installing existing package /packages/All/py311-setuptools-81.0.0.pkg [current-exp-job-01] Installing py311-setuptools-81.0.0... [current-exp-job-01] `-- Installing py311-more-itertools-10.6.0... [current-exp-job-01] `-- Extracting py311-more-itertools-10.6.0: .......... done [current-exp-job-01] `-- Installing py311-wheel-0.46.3_1... [current-exp-job-01] `-- Extracting py311-wheel-0.46.3_1: .......... done [current-exp-job-01] Extracting py311-setuptools-81.0.0: .......... done ===> py311-emmet-core-0.64.0_1 depends on package: py311-setuptools>=63.1.0 - found ===> Returning to build of py311-emmet-core-0.64.0_1 ===> py311-emmet-core-0.64.0_1 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Configuring for py311-emmet-core-0.64.0_1 ==> Starting sccache sccache: Starting the server... sccache: Listening on address /tmp/sccache-overlay.socket Compile requests 0 Compile requests executed 0 Cache hits 0 Cache misses 0 Cache hits rate - Cache timeouts 0 Cache read errors 0 Forced recaches 0 Cache write errors 0 Cache errors 0 Compilations 0 Compilation failures 0 Non-cacheable compilations 0 Non-cacheable calls 0 Non-compilation calls 0 Unsupported compiler calls 0 Average cache write 0.000 s Average compiler 0.000 s Average cache read hit 0.000 s Failed distributed compilations 0 Cache location redis, name: redis+unix://nobody/var/run/kvstore/valkey.sock, prefix: /sccache/ Version (client) 0.13.0 /usr/local/lib/python3.11/site-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) running config =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building for py311-emmet-core-0.64.0_1 /usr/local/lib/python3.11/site-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) running build running build_py creating build/lib/emmet/core copying emmet/core/material_property.py -> build/lib/emmet/core copying emmet/core/eos.py -> build/lib/emmet/core copying emmet/core/stubs.py -> build/lib/emmet/core copying emmet/core/polar.py -> build/lib/emmet/core copying emmet/core/corrected_entries.py -> build/lib/emmet/core copying emmet/core/symmetry.py -> build/lib/emmet/core copying emmet/core/substrates.py -> build/lib/emmet/core copying emmet/core/_messages.py -> build/lib/emmet/core copying emmet/core/common.py -> build/lib/emmet/core copying emmet/core/__init__.py -> build/lib/emmet/core copying emmet/core/mpcomplete.py -> build/lib/emmet/core copying emmet/core/molecules_jcesr.py -> build/lib/emmet/core copying emmet/core/oxidation_states.py -> build/lib/emmet/core copying emmet/core/surface_properties.py -> build/lib/emmet/core copying emmet/core/base.py -> build/lib/emmet/core copying emmet/core/summary.py -> build/lib/emmet/core copying emmet/core/formula_autocomplete.py -> build/lib/emmet/core copying emmet/core/similarity.py -> build/lib/emmet/core copying emmet/core/math.py -> build/lib/emmet/core copying emmet/core/absorption.py -> build/lib/emmet/core copying emmet/core/provenance.py -> build/lib/emmet/core copying emmet/core/phonon.py -> build/lib/emmet/core copying emmet/core/structure.py -> build/lib/emmet/core copying emmet/core/electronic_structure.py -> build/lib/emmet/core copying emmet/core/dois.py -> build/lib/emmet/core copying emmet/core/settings.py -> build/lib/emmet/core copying emmet/core/structure_group.py -> build/lib/emmet/core copying emmet/core/optimade.py -> build/lib/emmet/core copying emmet/core/grain_boundary.py -> build/lib/emmet/core copying emmet/core/material.py -> build/lib/emmet/core copying emmet/core/spectrum.py -> build/lib/emmet/core copying emmet/core/utils.py -> build/lib/emmet/core copying emmet/core/alloys.py -> build/lib/emmet/core copying emmet/core/chemenv.py -> build/lib/emmet/core copying emmet/core/tasks.py -> build/lib/emmet/core copying emmet/core/robocrys.py -> build/lib/emmet/core copying emmet/core/magnetism.py -> build/lib/emmet/core copying emmet/core/bonds.py -> build/lib/emmet/core copying emmet/core/charge_density.py -> build/lib/emmet/core copying emmet/core/elasticity.py -> build/lib/emmet/core copying emmet/core/electrode.py -> build/lib/emmet/core copying emmet/core/find_structure.py -> build/lib/emmet/core copying emmet/core/xrd.py -> build/lib/emmet/core copying emmet/core/thermo.py -> build/lib/emmet/core copying emmet/core/elasticity_legacy.py -> build/lib/emmet/core copying emmet/core/_user_settings.py -> build/lib/emmet/core copying emmet/core/mpid.py -> build/lib/emmet/core copying emmet/core/fermi.py -> build/lib/emmet/core copying emmet/core/_general_store.py -> build/lib/emmet/core copying emmet/core/task.py -> build/lib/emmet/core copying emmet/core/xas.py -> build/lib/emmet/core creating build/lib/emmet/core/feff copying emmet/core/feff/__init__.py -> build/lib/emmet/core/feff copying emmet/core/feff/task.py -> build/lib/emmet/core/feff creating build/lib/emmet/core/vasp copying emmet/core/vasp/__init__.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/validation.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/calculation.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/material.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/task_valid.py -> build/lib/emmet/core/vasp creating build/lib/emmet/core/qchem copying emmet/core/qchem/molecule.py -> build/lib/emmet/core/qchem copying emmet/core/qchem/__init__.py -> build/lib/emmet/core/qchem copying emmet/core/qchem/task.py -> build/lib/emmet/core/qchem creating build/lib/emmet/core/molecules copying emmet/core/molecules/__init__.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/molecule_property.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/summary.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/redox.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/vibration.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/metal_binding.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/orbitals.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/bonds.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/thermo.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/atomic.py -> build/lib/emmet/core/molecules creating build/lib/emmet/core/synthesis copying emmet/core/synthesis/__init__.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/materials.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/reaction.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/core.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/operations.py -> build/lib/emmet/core/synthesis creating build/lib/emmet/core/mobility copying emmet/core/mobility/migrationgraph.py -> build/lib/emmet/core/mobility creating build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/__init__.py -> build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/enums.py -> build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/utils.py -> build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/generate.py -> build/lib/emmet/core/vasp/calc_types creating build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/__init__.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/utils.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/generate.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/calc_types.py -> build/lib/emmet/core/qchem/calc_types running egg_info writing emmet_core.egg-info/PKG-INFO writing dependency_links to emmet_core.egg-info/dependency_links.txt writing requirements to emmet_core.egg-info/requires.txt writing top-level names to emmet_core.egg-info/top_level.txt reading manifest file 'emmet_core.egg-info/SOURCES.txt' writing manifest file 'emmet_core.egg-info/SOURCES.txt' copying emmet/core/vasp/calc_types/run_types.yaml -> build/lib/emmet/core/vasp/calc_types =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-emmet-core-0.64.0_1 depends on package: py311-monty>=2021.3 - not found ===> Installing existing package /packages/All/py311-monty-2026.2.18.pkg [current-exp-job-01] Installing py311-monty-2026.2.18... 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[current-exp-job-01] | | `-- Extracting mpfr-4.2.2,1: ........ done [current-exp-job-01] | | `-- Extracting mpc-1.3.1_1: ...... done [current-exp-job-01] | `-- Extracting gcc15-15.2.0_1: .......... done create symlink for gcc15 create symlink for gcc15 (world) create symlink for g++15 create symlink for g++15 (world) create symlink for cpp15 create symlink for cpp15 (world) [current-exp-job-01] | `-- Installing openblas-0.3.30,2... [current-exp-job-01] | `-- Extracting openblas-0.3.30,2: .......... done [current-exp-job-01] | `-- Installing suitesparse-umfpack-6.3.7... [current-exp-job-01] | | `-- Installing suitesparse-amd-3.3.4... [current-exp-job-01] | | `-- Installing suitesparse-config-7.12.2... [current-exp-job-01] | | `-- Extracting suitesparse-config-7.12.2: .......... done [current-exp-job-01] | | `-- Extracting suitesparse-amd-3.3.4: .......... done [current-exp-job-01] | | `-- Installing suitesparse-camd-3.3.5... 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[current-exp-job-01] | | `-- Extracting libedit-3.1.20251016_1,1: .......... done [current-exp-job-01] | | `-- Extracting sqlite3-3.50.4_2,1: .......... done [current-exp-job-01] | `-- Extracting py311-sqlite3-3.11.15_10: ...... done [current-exp-job-01] | `-- Installing py311-tzdata-2025.3... [current-exp-job-01] | `-- Extracting py311-tzdata-2025.3: .......... done [current-exp-job-01] `-- Extracting py311-pandas-2.3.3,1: .......... done [current-exp-job-01] `-- Installing py311-pydantic2-2.12.5... [current-exp-job-01] | `-- Installing py311-annotated-types-0.7.0... [current-exp-job-01] | `-- Extracting py311-annotated-types-0.7.0: .......... done [current-exp-job-01] | `-- Installing py311-pydantic-core-2.41.5_3... [current-exp-job-01] | `-- Extracting py311-pydantic-core-2.41.5_3: .......... done [current-exp-job-01] | `-- Installing py311-typing-inspection-0.4.2... [current-exp-job-01] | `-- Extracting py311-typing-inspection-0.4.2: .......... done [current-exp-job-01] `-- Extracting py311-pydantic2-2.12.5: .......... done [current-exp-job-01] `-- Installing py311-requests-2.32.5... [current-exp-job-01] | `-- Installing py311-certifi-2026.1.4... [current-exp-job-01] | `-- Extracting py311-certifi-2026.1.4: .......... done [current-exp-job-01] | `-- Installing py311-charset-normalizer-3.4.4... [current-exp-job-01] | `-- Extracting py311-charset-normalizer-3.4.4: .......... done [current-exp-job-01] | `-- Installing py311-idna-3.11... [current-exp-job-01] | `-- Extracting py311-idna-3.11: .......... done [current-exp-job-01] | `-- Installing py311-pysocks-1.7.1_1... [current-exp-job-01] | `-- Extracting py311-pysocks-1.7.1_1: .......... done [current-exp-job-01] | `-- Installing py311-urllib3-2.6.3,1... [current-exp-job-01] | | `-- Installing py311-brotli-1.2.0... [current-exp-job-01] | | `-- Installing brotli-1.2.0,1... [current-exp-job-01] | | `-- Extracting brotli-1.2.0,1: .......... done [current-exp-job-01] | | `-- Extracting py311-brotli-1.2.0: ......... done [current-exp-job-01] | `-- Extracting py311-urllib3-2.6.3,1: .......... done [current-exp-job-01] `-- Extracting py311-requests-2.32.5: .......... done [current-exp-job-01] `-- Installing py311-ruamel.yaml-0.19.1... [current-exp-job-01] | `-- Installing py311-ruamel.yaml.clib-0.2.15... [current-exp-job-01] | `-- Extracting py311-ruamel.yaml.clib-0.2.15: ...... done [current-exp-job-01] `-- Extracting py311-ruamel.yaml-0.19.1: .......... done [current-exp-job-01] `-- Installing py311-tqdm-4.67.3... [current-exp-job-01] `-- Extracting py311-tqdm-4.67.3: .......... done [current-exp-job-01] Extracting py311-monty-2026.2.18: .......... done ===== Message from gcc15-15.2.0_1: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc15 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from py311-pandas-2.3.3,1: -- Install math/py-statsmodels to enable parts of pandas.stats. Install devel/py-xarray to enable the to_xarray() function. ===== Message from py311-urllib3-2.6.3,1: -- Since version 1.25 HTTPS connections are now verified by default which is done via "cert_reqs = 'CERT_REQUIRED'". While certificate verification can be disabled via "cert_reqs = 'CERT_NONE'", it's highly recommended to leave it on. Various consumers of net/py-urllib3 already have implemented routines that either explicitly enable or disable HTTPS certificate verification (e.g. via configuration settings, CLI arguments, etc.). Yet it may happen that there are still some consumers which don't explicitly enable/disable certificate verification for HTTPS connections which could then lead to errors (as is often the case with self-signed certificates). In case of an error one should try first to temporarily disable certificate verification of the problematic urllib3 consumer to see if that approach will remedy the issue. ===> py311-emmet-core-0.64.0_1 depends on package: py311-monty>=2021.3 - found ===> Returning to build of py311-emmet-core-0.64.0_1 ===> py311-emmet-core-0.64.0_1 depends on package: py311-pybtex>=0.24 - not found ===> Installing existing package /packages/All/py311-pybtex-0.25.1.pkg [current-exp-job-01] Installing py311-pybtex-0.25.1... [current-exp-job-01] `-- Installing py311-latexcodec-3.0.1... [current-exp-job-01] `-- Extracting py311-latexcodec-3.0.1: .......... done [current-exp-job-01] `-- Installing py311-pyyaml-6.0.3... [current-exp-job-01] | `-- Installing libyaml-0.2.5... [current-exp-job-01] | `-- Extracting libyaml-0.2.5: ...... done [current-exp-job-01] `-- Extracting py311-pyyaml-6.0.3: .......... done [current-exp-job-01] Extracting py311-pybtex-0.25.1: .......... done ===> py311-emmet-core-0.64.0_1 depends on package: py311-pybtex>=0.24 - found ===> Returning to build of py311-emmet-core-0.64.0_1 ===> py311-emmet-core-0.64.0_1 depends on package: py311-pydantic2>=1.10.2 - found ===> py311-emmet-core-0.64.0_1 depends on package: py311-spglib>=2.0.1 - not found ===> Installing existing package /packages/All/py311-spglib-2.7.0.pkg [current-exp-job-01] Installing py311-spglib-2.7.0... [current-exp-job-01] `-- Installing spglib-2.7.0... [current-exp-job-01] `-- Extracting spglib-2.7.0: .......... done [current-exp-job-01] Extracting py311-spglib-2.7.0: .......... done ===> py311-emmet-core-0.64.0_1 depends on package: py311-spglib>=2.0.1 - found ===> Returning to build of py311-emmet-core-0.64.0_1 ===> py311-emmet-core-0.64.0_1 depends on package: py311-typing-extensions>=3.7<5.0 - found ===> py311-emmet-core-0.64.0_1 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Staging for py311-emmet-core-0.64.0_1 ===> Generating temporary packing list /usr/local/lib/python3.11/site-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) running install /usr/local/lib/python3.11/site-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing emmet_core.egg-info/PKG-INFO writing dependency_links to emmet_core.egg-info/dependency_links.txt writing requirements to emmet_core.egg-info/requires.txt writing top-level names to emmet_core.egg-info/top_level.txt reading manifest file 'emmet_core.egg-info/SOURCES.txt' writing manifest file 'emmet_core.egg-info/SOURCES.txt' running install_lib creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/material_property.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/eos.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/stubs.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/polar.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/corrected_entries.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/symmetry.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/substrates.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/_messages.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/common.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/mpcomplete.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/molecules_jcesr.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/oxidation_states.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/surface_properties.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/feff copying build/lib/emmet/core/feff/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/feff copying build/lib/emmet/core/feff/task.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/feff copying build/lib/emmet/core/base.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/summary.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/formula_autocomplete.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/similarity.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/math.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/absorption.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/provenance.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp copying build/lib/emmet/core/vasp/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp copying build/lib/emmet/core/vasp/validation.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp copying build/lib/emmet/core/vasp/calculation.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/enums.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/utils.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/run_types.yaml -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/generate.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/material.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp copying build/lib/emmet/core/vasp/task_valid.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp copying build/lib/emmet/core/phonon.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/structure.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/electronic_structure.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem copying build/lib/emmet/core/qchem/molecule.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem copying build/lib/emmet/core/qchem/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/utils.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/generate.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/calc_types.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/task.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem copying build/lib/emmet/core/dois.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/settings.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/structure_group.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/optimade.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/grain_boundary.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/material.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/spectrum.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/utils.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/alloys.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/chemenv.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/tasks.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/molecule_property.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/summary.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/redox.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/vibration.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/metal_binding.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/orbitals.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/bonds.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/thermo.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/molecules/atomic.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules copying build/lib/emmet/core/robocrys.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/magnetism.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/bonds.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis copying build/lib/emmet/core/synthesis/__init__.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis copying build/lib/emmet/core/synthesis/materials.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis copying build/lib/emmet/core/synthesis/reaction.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis copying build/lib/emmet/core/synthesis/core.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis copying build/lib/emmet/core/synthesis/operations.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis copying build/lib/emmet/core/charge_density.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/elasticity.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/electrode.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/find_structure.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/xrd.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core creating /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/mobility copying build/lib/emmet/core/mobility/migrationgraph.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/mobility copying build/lib/emmet/core/thermo.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/elasticity_legacy.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/_user_settings.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/mpid.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/fermi.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/_general_store.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/task.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core copying build/lib/emmet/core/xas.py -> /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/material_property.py to material_property.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/eos.py to eos.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/stubs.py to stubs.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/polar.py to polar.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/corrected_entries.py to corrected_entries.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/symmetry.py to symmetry.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/substrates.py to substrates.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/_messages.py to _messages.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/common.py to common.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/mpcomplete.py to mpcomplete.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules_jcesr.py to molecules_jcesr.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/oxidation_states.py to oxidation_states.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/surface_properties.py to surface_properties.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/feff/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/feff/task.py to task.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/base.py to base.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/summary.py to summary.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/formula_autocomplete.py to formula_autocomplete.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/similarity.py to similarity.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/math.py to math.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/absorption.py to absorption.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/provenance.py to provenance.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/validation.py to validation.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calculation.py to calculation.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types/enums.py to enums.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types/utils.py to utils.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/calc_types/generate.py to generate.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/material.py to material.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/vasp/task_valid.py to task_valid.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/phonon.py to phonon.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/structure.py to structure.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/electronic_structure.py to electronic_structure.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/molecule.py to molecule.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types/utils.py to utils.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types/generate.py to generate.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/calc_types/calc_types.py to calc_types.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/qchem/task.py to task.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/dois.py to dois.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/settings.py to settings.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/structure_group.py to structure_group.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/optimade.py to optimade.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/grain_boundary.py to grain_boundary.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/material.py to material.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/spectrum.py to spectrum.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/utils.py to utils.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/alloys.py to alloys.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/chemenv.py to chemenv.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/tasks.py to tasks.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/molecule_property.py to molecule_property.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/summary.py to summary.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/redox.py to redox.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/vibration.py to vibration.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/metal_binding.py to metal_binding.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/orbitals.py to orbitals.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/bonds.py to bonds.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/thermo.py to thermo.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/molecules/atomic.py to atomic.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/robocrys.py to robocrys.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/magnetism.py to magnetism.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/bonds.py to bonds.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis/materials.py to materials.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis/reaction.py to reaction.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis/core.py to core.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/synthesis/operations.py to operations.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/charge_density.py to charge_density.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/elasticity.py to elasticity.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/electrode.py to electrode.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/find_structure.py to find_structure.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/xrd.py to xrd.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/mobility/migrationgraph.py to migrationgraph.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/thermo.py to thermo.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/elasticity_legacy.py to elasticity_legacy.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/_user_settings.py to _user_settings.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/mpid.py to mpid.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/fermi.py to fermi.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/_general_store.py to _general_store.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/task.py to task.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet/core/xas.py to xas.cpython-311.pyc writing byte-compilation script '/tmp/tmpwxeerg0c.py' /usr/local/bin/python3.11 /tmp/tmpwxeerg0c.py removing /tmp/tmpwxeerg0c.py running install_egg_info Copying emmet_core.egg-info to /wrkdirs/usr/ports/science/py-emmet-core/work-py311/stage/usr/local/lib/python3.11/site-packages/emmet_core-0.64.0-py3.11.egg-info running install_scripts writing list of installed files to '/wrkdirs/usr/ports/science/py-emmet-core/work-py311/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) ==> sccache statistics Compile requests 0 Compile requests executed 0 Cache hits 0 Cache misses 0 Cache hits rate - Cache timeouts 0 Cache read errors 0 Forced recaches 0 Cache write errors 0 Cache errors 0 Compilations 0 Compilation failures 0 Non-cacheable compilations 0 Non-cacheable calls 0 Non-compilation calls 0 Unsupported compiler calls 0 Average cache write 0.000 s Average compiler 0.000 s Average cache read hit 0.000 s Failed distributed compilations 0 Cache location redis, name: redis+unix://nobody/var/run/kvstore/valkey.sock, prefix: /sccache/ Version (client) 0.13.0 =========================================================================== =================================================== ===== env: 'PKG_NOTES=port_checkout_unclean' 'PKG_NOTE_port_checkout_unclean=no' PKG_NO_VERSION_FOR_DEPS=1 NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building packages for py311-emmet-core-0.64.0_1 ===> Building py311-emmet-core-0.64.0_1 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-emmet-core-0.64.0_1 build of science/py-emmet-core@py311 | py311-emmet-core-0.64.0_1 ended at 2026-03-18T18:14:01-04:00 build time: 00:02:21 times end [shell] (user/sys/real): 0m0.069s 0m0.079s 2m21.000s times end [child] (user/sys/real): 0m18.163s 0m8.174s 2m21.000s