====>> Building science/avogadro build started at Mon Jan 11 12:23:59 PST 2016 port directory: /usr/ports/science/avogadro building for: FreeBSD 101amd64-boost160-boostusers-job-04 10.1-RELEASE-p25 FreeBSD 10.1-RELEASE-p25 amd64 maintained by: ports@FreeBSD.org Makefile ident: $FreeBSD: head/science/avogadro/Makefile 380106 2015-02-27 16:47:04Z amdmi3 $ Poudriere version: 3.1.10 Host OSVERSION: 1100085 Jail OSVERSION: 1001000 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1001000 UNAME_v=FreeBSD 10.1-RELEASE-p25 UNAME_r=10.1-RELEASE-p25 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM=xterm MASTERMNT=/var/poudriere/data/.m/101amd64-boost160-boostusers/ref FORCE_PACKAGE=yes PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNAME=avogadro-1.1.1_3 OLDPWD=/ PWD=/var/poudriere/data/.m/101amd64-boost160-boostusers/ref/.p/pool MASTERNAME=101amd64-boost160-boostusers SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root POUDRIERE_VERSION=3.1.10 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for avogadro-1.1.1_3: PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --with-qt-includes=/usr/local/include/qt4 --with-qt-libraries=/usr/local/lib/qt4 --with-extra-includes=/usr/local/include --with-extra-libs=/usr/local/lib --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadro/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadro/work HOME=/wrkdirs/usr/ports/science/avogadro/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh QTDIR="/usr/local" QMAKE="/usr/local/bin/qmake-qt4" MOC="/usr/local/bin/moc-qt4" RCC="/usr/local/bin/rcc" UIC="/usr/local/bin/uic-qt4" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-$(ccver="$(c++ --version)"; case "$ccver" in *clang*) echo clang ;; *) echo g++ ;; esac)" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadro/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadro/work HOME=/wrkdirs/usr/ports/science/avogadro/work TMPDIR="/tmp" NO_PIE=yes NO_DEBUG_FILES=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib -fstack-protector" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON="" NO_PYTHON="@comment " QT_PREFIX="/usr/local" QT_BINDIR="bin" QT_INCDIR="include/qt4" QT_LIBDIR="lib/qt4" QT_ARCHDIR="lib/qt4/qt4" QT_PLUGINDIR="lib/qt4/plugins" QT_LIBEXECDIR="libexec/qt4" QT_IMPORTDIR="lib/qt4/imports" QT_QMLDIR="lib/qt4/qt4/qml" QT_DATADIR="share/qt4" QT_DOCDIR="share/doc/qt4" QT_L10NDIR="share/qt4/translations" QT_ETCDIR="etc/xdg" QT_EXAMPLEDIR="share/examples/qt4" QT_TESTDIR="share/qt4/tests" QT_MKSPECDIR="share/qt4/mkspecs" CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd10 PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_VER=2.7 PYTHON_VERSION=python2.7 OSREL=10.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/avogadro" EXAMPLESDIR="share/examples/avogadro" DATADIR="share/avogadro" WWWDIR="www/avogadro" ETCDIR="etc/avogadro" --End PLIST_SUB-- --SUB_LIST-- PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/avogadro DOCSDIR=/usr/local/share/doc/avogadro EXAMPLESDIR=/usr/local/share/examples/avogadro WWWDIR=/usr/local/www/avogadro ETCDIR=/usr/local/etc/avogadro --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/boostusers-make.conf #### OPTIONS_SET=REGEX OQGRAPH BOOST MOD_BOOLEAN ASIO MNUMPY DISABLE_VULNERABILITIES=yes #### /usr/local/etc/poudriere.d/101amd64-make.conf #### #CPUTYPE=athlon64 LICENSES_ACCEPTED=jgraph ---End make.conf--- =================================================== ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===> avogadro-1.1.1_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.6.2.txz [101amd64-boost160-boostusers-job-04] Installing pkg-1.6.2... [101amd64-boost160-boostusers-job-04] Extracting pkg-1.6.2: .......... done Message from pkg-1.6.2: If you are upgrading from the old package format, first run: # pkg2ng ===> avogadro-1.1.1_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of avogadro-1.1.1_3 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadro-1.1.1_3 for building =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadro-1.1.1_3 for building => SHA256 Checksum OK for avogadro-1.1.1.tar.bz2. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadro-1.1.1_3 for building ===> Extracting for avogadro-1.1.1_3 => SHA256 Checksum OK for avogadro-1.1.1.tar.bz2. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for avogadro-1.1.1_3 ===> Applying FreeBSD patches for avogadro-1.1.1_3 =========================================================================== =================================================== ===> avogadro-1.1.1_3 depends on package: eigen2>2 - not found ===> Installing existing package /packages/All/eigen2-2.0.17,1.txz [101amd64-boost160-boostusers-job-04] Installing eigen2-2.0.17,1... [101amd64-boost160-boostusers-job-04] Extracting eigen2-2.0.17,1: .......... done ===> avogadro-1.1.1_3 depends on package: eigen2>2 - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found ===> Installing existing package /packages/All/py27-numpy-1.10.4,1.txz [101amd64-boost160-boostusers-job-04] Installing py27-numpy-1.10.4,1... [101amd64-boost160-boostusers-job-04] `-- Installing python27-2.7.11_1... [101amd64-boost160-boostusers-job-04] | `-- Installing libffi-3.2.1... [101amd64-boost160-boostusers-job-04] | | `-- Installing indexinfo-0.2.4... [101amd64-boost160-boostusers-job-04] | | `-- Extracting indexinfo-0.2.4: .... done [101amd64-boost160-boostusers-job-04] | `-- Extracting libffi-3.2.1: .......... done [101amd64-boost160-boostusers-job-04] | `-- Installing gettext-runtime-0.19.6... [101amd64-boost160-boostusers-job-04] | `-- Extracting gettext-runtime-0.19.6: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting python27-2.7.11_1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing py27-setuptools27-19.2... [101amd64-boost160-boostusers-job-04] `-- Extracting py27-setuptools27-19.2: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing gcc-4.8.5_2... [101amd64-boost160-boostusers-job-04] | `-- Installing mpc-1.0.3... [101amd64-boost160-boostusers-job-04] | | `-- Installing gmp-5.1.3_2... [101amd64-boost160-boostusers-job-04] | | `-- Extracting gmp-5.1.3_2: .......... done [101amd64-boost160-boostusers-job-04] | | `-- Installing mpfr-3.1.3... [101amd64-boost160-boostusers-job-04] | | `-- Extracting mpfr-3.1.3: .......... done [101amd64-boost160-boostusers-job-04] | `-- Extracting mpc-1.0.3: ...... done [101amd64-boost160-boostusers-job-04] | `-- Installing binutils-2.25.1... [101amd64-boost160-boostusers-job-04] | `-- Extracting binutils-2.25.1: .......... done [101amd64-boost160-boostusers-job-04] | `-- Installing gcc-ecj-4.5... [101amd64-boost160-boostusers-job-04] | `-- Extracting gcc-ecj-4.5: . done [101amd64-boost160-boostusers-job-04] `-- Extracting gcc-4.8.5_2: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing suitesparse-4.0.2_4... [101amd64-boost160-boostusers-job-04] | `-- Installing openblas-0.2.14,1... [101amd64-boost160-boostusers-job-04] | `-- Extracting openblas-0.2.14,1: ......... done [101amd64-boost160-boostusers-job-04] `-- Extracting suitesparse-4.0.2_4: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing blas-3.5.0_3... [101amd64-boost160-boostusers-job-04] `-- Extracting blas-3.5.0_3: ....... done [101amd64-boost160-boostusers-job-04] `-- Installing lapack-3.5.0... [101amd64-boost160-boostusers-job-04] `-- Extracting lapack-3.5.0: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing cblas-1.0_4... [101amd64-boost160-boostusers-job-04] `-- Extracting cblas-1.0_4: ......... done [101amd64-boost160-boostusers-job-04] Extracting py27-numpy-1.10.4,1: .......... done Message from python27-2.7.11_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== Message from gcc-4.8.5_2: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc48 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on package: py27-sip>0 - not found ===> Installing existing package /packages/All/py27-sip-4.17,1.txz [101amd64-boost160-boostusers-job-04] Installing py27-sip-4.17,1... [101amd64-boost160-boostusers-job-04] Extracting py27-sip-4.17,1: .......... done ===> avogadro-1.1.1_3 depends on package: py27-sip>0 - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.4.1.txz [101amd64-boost160-boostusers-job-04] Installing cmake-3.4.1... [101amd64-boost160-boostusers-job-04] `-- Installing expat-2.1.0_3... [101amd64-boost160-boostusers-job-04] `-- Extracting expat-2.1.0_3: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing cmake-modules-3.4.1... [101amd64-boost160-boostusers-job-04] `-- Extracting cmake-modules-3.4.1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing curl-7.46.0_1... [101amd64-boost160-boostusers-job-04] | `-- Installing ca_root_nss-3.21... [101amd64-boost160-boostusers-job-04] | `-- Extracting ca_root_nss-3.21: ....... done [101amd64-boost160-boostusers-job-04] `-- Extracting curl-7.46.0_1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libarchive-3.1.2_4,1... [101amd64-boost160-boostusers-job-04] | `-- Installing lzo2-2.09... [101amd64-boost160-boostusers-job-04] | `-- Extracting lzo2-2.09: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting libarchive-3.1.2_4,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing jsoncpp-0.6.0.r2_2... [101amd64-boost160-boostusers-job-04] `-- Extracting jsoncpp-0.6.0.r2_2: .......... done [101amd64-boost160-boostusers-job-04] Extracting cmake-3.4.1: .......... done Message from ca_root_nss-3.21: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/cmake - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on executable: update-desktop-database - not found ===> Installing existing package /packages/All/desktop-file-utils-0.22_3.txz [101amd64-boost160-boostusers-job-04] Installing desktop-file-utils-0.22_3... [101amd64-boost160-boostusers-job-04] `-- Installing glib-2.44.1_2... [101amd64-boost160-boostusers-job-04] | `-- Installing libiconv-1.14_9... [101amd64-boost160-boostusers-job-04] | `-- Extracting libiconv-1.14_9: .......... done [101amd64-boost160-boostusers-job-04] | `-- Installing pcre-8.37_4... [101amd64-boost160-boostusers-job-04] | `-- Extracting pcre-8.37_4: .......... done [101amd64-boost160-boostusers-job-04] | `-- Installing perl5-5.20.3_8... [101amd64-boost160-boostusers-job-04] | `-- Extracting perl5-5.20.3_8: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting glib-2.44.1_2: .......... done No schema files found: doing nothing. [101amd64-boost160-boostusers-job-04] Extracting desktop-file-utils-0.22_3: ......... done Message from perl5-5.20.3_8: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> avogadro-1.1.1_3 depends on executable: update-desktop-database - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on executable: pkgconf - not found ===> Installing existing package /packages/All/pkgconf-0.9.12_1.txz [101amd64-boost160-boostusers-job-04] Installing pkgconf-0.9.12_1... [101amd64-boost160-boostusers-job-04] Extracting pkgconf-0.9.12_1: ....... done ===> avogadro-1.1.1_3 depends on executable: pkgconf - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/python2.7 - found ===> avogadro-1.1.1_3 depends on executable: python2 - not found ===> Installing existing package /packages/All/python2-2_3.txz [101amd64-boost160-boostusers-job-04] Installing python2-2_3... [101amd64-boost160-boostusers-job-04] Extracting python2-2_3: ...... done ===> avogadro-1.1.1_3 depends on executable: python2 - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on package: libGL>0 - not found ===> Installing existing package /packages/All/libGL-11.0.8.txz [101amd64-boost160-boostusers-job-04] Installing libGL-11.0.8... [101amd64-boost160-boostusers-job-04] `-- Installing dri2proto-2.8... [101amd64-boost160-boostusers-job-04] `-- Extracting dri2proto-2.8: .... done [101amd64-boost160-boostusers-job-04] `-- Installing libXdamage-1.1.4_3... [101amd64-boost160-boostusers-job-04] | `-- Installing libXfixes-5.0.1_3... [101amd64-boost160-boostusers-job-04] | | `-- Installing xproto-7.0.28... [101amd64-boost160-boostusers-job-04] | | `-- Extracting xproto-7.0.28: .......... done [101amd64-boost160-boostusers-job-04] | | `-- Installing fixesproto-5.0... [101amd64-boost160-boostusers-job-04] | | `-- Extracting fixesproto-5.0: .... done [101amd64-boost160-boostusers-job-04] | | `-- Installing libX11-1.6.3,1... [101amd64-boost160-boostusers-job-04] | | `-- Installing kbproto-1.0.7... [101amd64-boost160-boostusers-job-04] | | `-- Extracting kbproto-1.0.7: .......... done [101amd64-boost160-boostusers-job-04] | | `-- Installing libXdmcp-1.1.2... [101amd64-boost160-boostusers-job-04] | | `-- Extracting libXdmcp-1.1.2: ......... done [101amd64-boost160-boostusers-job-04] | | `-- Installing libxcb-1.11.1... [101amd64-boost160-boostusers-job-04] | | | `-- Installing libxml2-2.9.3... [101amd64-boost160-boostusers-job-04] | | | `-- Extracting libxml2-2.9.3: .......... done [101amd64-boost160-boostusers-job-04] | | | `-- Installing libpthread-stubs-0.3_6... [101amd64-boost160-boostusers-job-04] | | | `-- Extracting libpthread-stubs-0.3_6: ..... done [101amd64-boost160-boostusers-job-04] | | | `-- Installing libXau-1.0.8_3... [101amd64-boost160-boostusers-job-04] | | | `-- Extracting libXau-1.0.8_3: .......... done [101amd64-boost160-boostusers-job-04] | | `-- Extracting libxcb-1.11.1: .......... done [101amd64-boost160-boostusers-job-04] | | `-- Extracting libX11-1.6.3,1: .......... done [101amd64-boost160-boostusers-job-04] | `-- Extracting libXfixes-5.0.1_3: .......... done [101amd64-boost160-boostusers-job-04] | `-- Installing damageproto-1.2.1... [101amd64-boost160-boostusers-job-04] | `-- Extracting damageproto-1.2.1: .... done [101amd64-boost160-boostusers-job-04] `-- Extracting libXdamage-1.1.4_3: ...... done [101amd64-boost160-boostusers-job-04] `-- Installing libdevq-0.0.2_1... [101amd64-boost160-boostusers-job-04] `-- Extracting libdevq-0.0.2_1: ..... done [101amd64-boost160-boostusers-job-04] `-- Installing libXxf86vm-1.1.4_1... [101amd64-boost160-boostusers-job-04] | `-- Installing xf86vidmodeproto-2.3.1... [101amd64-boost160-boostusers-job-04] | `-- Extracting xf86vidmodeproto-2.3.1: .... done [101amd64-boost160-boostusers-job-04] | `-- Installing libXext-1.3.3_1,1... [101amd64-boost160-boostusers-job-04] | | `-- Installing xextproto-7.3.0... [101amd64-boost160-boostusers-job-04] | | `-- Extracting xextproto-7.3.0: .......... done [101amd64-boost160-boostusers-job-04] | `-- Extracting libXext-1.3.3_1,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting libXxf86vm-1.1.4_1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libdrm-2.4.65_1,1... [101amd64-boost160-boostusers-job-04] | `-- Installing libpciaccess-0.13.4... [101amd64-boost160-boostusers-job-04] | | `-- Installing pciids-20151224... [101amd64-boost160-boostusers-job-04] | | `-- Extracting pciids-20151224: ...... done [101amd64-boost160-boostusers-job-04] | `-- Extracting libpciaccess-0.13.4: ...... done [101amd64-boost160-boostusers-job-04] `-- Extracting libdrm-2.4.65_1,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libxshmfence-1.2... [101amd64-boost160-boostusers-job-04] `-- Extracting libxshmfence-1.2: ......... done [101amd64-boost160-boostusers-job-04] `-- Installing libglapi-11.0.8... [101amd64-boost160-boostusers-job-04] | `-- Installing libXvMC-1.0.9... [101amd64-boost160-boostusers-job-04] | | `-- Installing libXv-1.0.10_3,1... [101amd64-boost160-boostusers-job-04] | | `-- Installing videoproto-2.3.2... [101amd64-boost160-boostusers-job-04] | | `-- Extracting videoproto-2.3.2: ...... done [101amd64-boost160-boostusers-job-04] | | `-- Extracting libXv-1.0.10_3,1: .......... done [101amd64-boost160-boostusers-job-04] | `-- Extracting libXvMC-1.0.9: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting libglapi-11.0.8: ... done [101amd64-boost160-boostusers-job-04] Extracting libGL-11.0.8: .......... done ===> avogadro-1.1.1_3 depends on package: libGL>0 - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - not found ===> Installing existing package /packages/All/glproto-1.4.17.txz [101amd64-boost160-boostusers-job-04] Installing glproto-1.4.17... [101amd64-boost160-boostusers-job-04] Extracting glproto-1.4.17: ...... done ===> avogadro-1.1.1_3 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/libdata/pkgconfig/dri2proto.pc - found ===> avogadro-1.1.1_3 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - found ===> avogadro-1.1.1_3 depends on file: /usr/local/libdata/pkgconfig/dri2proto.pc - found ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/qt4/libQtGui.so - not found ===> Installing existing package /packages/All/qt4-gui-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-gui-4.8.7... [101amd64-boost160-boostusers-job-04] `-- Installing encodings-1.0.4_3,1... [101amd64-boost160-boostusers-job-04] | `-- Installing font-util-1.3.1... [101amd64-boost160-boostusers-job-04] | `-- Extracting font-util-1.3.1: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting encodings-1.0.4_3,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libXt-1.1.5,1... [101amd64-boost160-boostusers-job-04] | `-- Installing libSM-1.2.2_3,1... [101amd64-boost160-boostusers-job-04] | | `-- Installing libICE-1.0.9_1,1... [101amd64-boost160-boostusers-job-04] | | `-- Extracting libICE-1.0.9_1,1: .......... done [101amd64-boost160-boostusers-job-04] | `-- Extracting libSM-1.2.2_3,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting libXt-1.1.5,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libXcursor-1.1.14_3... [101amd64-boost160-boostusers-job-04] | `-- Installing libXrender-0.9.9... [101amd64-boost160-boostusers-job-04] | | `-- Installing renderproto-0.11.1... [101amd64-boost160-boostusers-job-04] | | `-- Extracting renderproto-0.11.1: .... done [101amd64-boost160-boostusers-job-04] | `-- Extracting libXrender-0.9.9: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting libXcursor-1.1.14_3: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing qt4-corelib-4.8.7_1... [101amd64-boost160-boostusers-job-04] | `-- Installing icu-55.1... [101amd64-boost160-boostusers-job-04] | `-- Extracting icu-55.1: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting qt4-corelib-4.8.7_1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing png-1.6.20... [101amd64-boost160-boostusers-job-04] `-- Extracting png-1.6.20: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libXinerama-1.1.3_3,1... [101amd64-boost160-boostusers-job-04] | `-- Installing xineramaproto-1.2.1... [101amd64-boost160-boostusers-job-04] | `-- Extracting xineramaproto-1.2.1: .. done [101amd64-boost160-boostusers-job-04] `-- Extracting libXinerama-1.1.3_3,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing fontconfig-2.11.1_1,1... [101amd64-boost160-boostusers-job-04] | `-- Installing freetype2-2.6.2... [101amd64-boost160-boostusers-job-04] | `-- Extracting freetype2-2.6.2: .......... done [101amd64-boost160-boostusers-job-04] `-- Extracting fontconfig-2.11.1_1,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: caching, new cache contents: 0 fonts, 2 dirs /usr/local/share/fonts/encodings: caching, new cache contents: 0 fonts, 1 dirs /usr/local/share/fonts/encodings/large: caching, new cache contents: 0 fonts, 0 dirs /usr/local/share/fonts/util: make: Working in: /usr/ports/science/avogadro caching, new cache contents: 0 fonts, 0 dirs /usr/local/lib/X11/fonts: skipping, no such directory /root/.local/share/fonts: skipping, no such directory /root/.fonts: skipping, no such directory Re-scanning /usr/local/share/fonts: caching, new cache contents: 0 fonts, 2 dirs Re-scanning /usr/local/share/fonts/encodings: caching, new cache contents: 0 fonts, 1 dirs /var/db/fontconfig: cleaning cache directory /root/.cache/fontconfig: not cleaning non-existent cache directory /root/.fontconfig: not cleaning non-existent cache directory fc-cache: succeeded [101amd64-boost160-boostusers-job-04] `-- Installing xorg-fonts-truetype-7.7_1... [101amd64-boost160-boostusers-job-04] | `-- Installing font-misc-meltho-1.0.3_3... [101amd64-boost160-boostusers-job-04] | | `-- Installing mkfontdir-1.0.7... [101amd64-boost160-boostusers-job-04] | | `-- Installing mkfontscale-1.1.2... [101amd64-boost160-boostusers-job-04] | | | `-- Installing libfontenc-1.1.3... [101amd64-boost160-boostusers-job-04] | | | `-- Extracting libfontenc-1.1.3: ...... done [101amd64-boost160-boostusers-job-04] | | `-- Extracting mkfontscale-1.1.2: .. done [101amd64-boost160-boostusers-job-04] | | `-- Extracting mkfontdir-1.0.7: .. done [101amd64-boost160-boostusers-job-04] | `-- Extracting font-misc-meltho-1.0.3_3: .......... done [101amd64-boost160-boostusers-job-04] | `-- Installing font-bh-ttf-1.0.3_3... [101amd64-boost160-boostusers-job-04] | `-- Extracting font-bh-ttf-1.0.3_3: .......... done [101amd64-boost160-boostusers-job-04] | `-- Installing font-misc-ethiopic-1.0.3_3... [101amd64-boost160-boostusers-job-04] | `-- Extracting font-misc-ethiopic-1.0.3_3: .. done [101amd64-boost160-boostusers-job-04] | `-- Installing dejavu-2.35... [101amd64-boost160-boostusers-job-04] | `-- Extracting dejavu-2.35: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libXi-1.7.6,1... [101amd64-boost160-boostusers-job-04] | `-- Installing inputproto-2.3.1... [101amd64-boost160-boostusers-job-04] | `-- Extracting inputproto-2.3.1: ..... done [101amd64-boost160-boostusers-job-04] `-- Extracting libXi-1.7.6,1: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing libXrandr-1.5.0... [101amd64-boost160-boostusers-job-04] | `-- Installing randrproto-1.5.0... [101amd64-boost160-boostusers-job-04] | `-- Extracting randrproto-1.5.0: .... done [101amd64-boost160-boostusers-job-04] `-- Extracting libXrandr-1.5.0: .......... done [101amd64-boost160-boostusers-job-04] `-- Installing xdg-utils-1.0.2.20130919_1... [101amd64-boost160-boostusers-job-04] | `-- Installing hicolor-icon-theme-0.15... [101amd64-boost160-boostusers-job-04] | `-- Extracting hicolor-icon-theme-0.15: . done [101amd64-boost160-boostusers-job-04] | `-- Installing xset-1.2.3_1... [101amd64-boost160-boostusers-job-04] | | `-- Installing libXfontcache-1.0.5_3... [101amd64-boost160-boostusers-job-04] | | `-- Installing fontcacheproto-0.1.3... [101amd64-boost160-boostusers-job-04] | | `-- Extracting fontcacheproto-0.1.3: .... done [101amd64-boost160-boostusers-job-04] | | `-- Extracting libXfontcache-1.0.5_3: .......... done [101amd64-boost160-boostusers-job-04] | | `-- Installing libXmu-1.1.2_3,1... [101amd64-boost160-boostusers-job-04] | | `-- Extracting libXmu-1.1.2_3,1: .......... done [101amd64-boost160-boostusers-job-04] | `-- Extracting xset-1.2.3_1: .. done [101amd64-boost160-boostusers-job-04] | `-- Installing xprop-1.2.2... [101amd64-boost160-boostusers-job-04] | `-- Extracting xprop-1.2.2: .. done [101amd64-boost160-boostusers-job-04] `-- Extracting xdg-utils-1.0.2.20130919_1: .......... done [101amd64-boost160-boostusers-job-04] Extracting qt4-gui-4.8.7: .......... done Message from qt4-corelib-4.8.7_1: ====================================================================== Qt 4 can be built with optional support for: - Common UNIX Printing System (CUPS) (enabled by default) - Network Audio System (NAS) - Qt style that renders using GTK (QGTKSTYLE) In order to enable them, you have to add QT4_OPTIONS= CUPS NAS QGTKSTYLE to your /etc/make.conf and compile devel/qt4-corelib and x11-toolkits/qt4-gui ports. Attention! Whenever you change the QT4_OPTIONS both devel/qt4-corelib and x11-toolkits/qt4-gui ports must be rebuilt! ====================================================================== Message from dejavu-2.35: Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/qt4/libQtGui.so - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/lrelease-qt4 - not found ===> Installing existing package /packages/All/qt4-linguisttools-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-linguisttools-4.8.7... [101amd64-boost160-boostusers-job-04] `-- Installing qt4-xml-4.8.7... [101amd64-boost160-boostusers-job-04] `-- Extracting qt4-xml-4.8.7: .......... done [101amd64-boost160-boostusers-job-04] Extracting qt4-linguisttools-4.8.7: ...... done ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/lrelease-qt4 - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/moc-qt4 - not found ===> Installing existing package /packages/All/qt4-moc-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-moc-4.8.7... [101amd64-boost160-boostusers-job-04] Extracting qt4-moc-4.8.7: .... done ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/moc-qt4 - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/qt4/libQtNetwork.so - not found ===> Installing existing package /packages/All/qt4-network-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-network-4.8.7... [101amd64-boost160-boostusers-job-04] Extracting qt4-network-4.8.7: .......... done ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/qt4/libQtNetwork.so - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/qt4/libQtOpenGL.so - not found ===> Installing existing package /packages/All/qt4-opengl-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-opengl-4.8.7... [101amd64-boost160-boostusers-job-04] Extracting qt4-opengl-4.8.7: .......... done ===> avogadro-1.1.1_3 depends on file: /usr/local/lib/qt4/libQtOpenGL.so - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/qmake-qt4 - not found ===> Installing existing package /packages/All/qt4-qmake-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-qmake-4.8.7... [101amd64-boost160-boostusers-job-04] Extracting qt4-qmake-4.8.7: .......... done ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/qmake-qt4 - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/rcc - not found ===> Installing existing package /packages/All/qt4-rcc-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-rcc-4.8.7... [101amd64-boost160-boostusers-job-04] Extracting qt4-rcc-4.8.7: .... done ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/rcc - found ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/uic-qt4 - not found ===> Installing existing package /packages/All/qt4-uic-4.8.7.txz [101amd64-boost160-boostusers-job-04] Installing qt4-uic-4.8.7... [101amd64-boost160-boostusers-job-04] Extracting qt4-uic-4.8.7: .... done ===> avogadro-1.1.1_3 depends on file: /usr/local/bin/uic-qt4 - found ===> Returning to build of avogadro-1.1.1_3 =========================================================================== =================================================== ===> avogadro-1.1.1_3 depends on shared library: libopenbabel.so - not found ===> Installing existing package /packages/All/openbabel-2.3.2_2.txz [101amd64-boost160-boostusers-job-04] Installing openbabel-2.3.2_2... [101amd64-boost160-boostusers-job-04] Extracting openbabel-2.3.2_2: .......... done ===> avogadro-1.1.1_3 depends on shared library: libopenbabel.so - found (/usr/local/lib/libopenbabel.so) ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on shared library: libboost_python.so - not found ===> Installing existing package /packages/All/boost-python-libs-1.60.0.txz [101amd64-boost160-boostusers-job-04] Installing boost-python-libs-1.60.0... [101amd64-boost160-boostusers-job-04] `-- Installing boost-libs-1.60.0... [101amd64-boost160-boostusers-job-04] `-- Extracting boost-libs-1.60.0: .......... done [101amd64-boost160-boostusers-job-04] Extracting boost-python-libs-1.60.0: .... done Message from boost-libs-1.60.0: You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. Message from boost-python-libs-1.60.0: You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. You have built the Boost.Python library. You have to add the following options when building your own code: Compiler options: -I/usr/local/include/python2.7 -I/usr/local/include Linker options: -L/usr/local/lib/python2.7 -L/usr/local/lib -lboost_python -lpython2.7 ===> avogadro-1.1.1_3 depends on shared library: libboost_python.so - found (/usr/local/lib/libboost_python.so) ===> Returning to build of avogadro-1.1.1_3 ===> avogadro-1.1.1_3 depends on shared library: libGLU.so - not found ===> Installing existing package /packages/All/libGLU-9.0.0_2.txz [101amd64-boost160-boostusers-job-04] Installing libGLU-9.0.0_2... [101amd64-boost160-boostusers-job-04] Extracting libGLU-9.0.0_2: ...... done ===> avogadro-1.1.1_3 depends on shared library: libGLU.so - found (/usr/local/lib/libGLU.so) ===> Returning to build of avogadro-1.1.1_3 =========================================================================== =================================================== ===> Configuring for avogadro-1.1.1_3 ===> Performing in-source build /bin/mkdir -p /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 -- The C compiler identification is Clang 3.4.1 -- The CXX compiler identification is Clang 3.4.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- The build type is Release -- Looking for Q_WS_X11 -- Looking for Q_WS_X11 - found -- Looking for Q_WS_WIN -- Looking for Q_WS_WIN - not found -- Looking for Q_WS_QWS -- Looking for Q_WS_QWS - not found -- Looking for Q_WS_MAC -- Looking for Q_WS_MAC - not found -- Found Qt4: /usr/local/bin/qmake-qt4 (found suitable version "4.8.7", minimum required is "4.6.0") -- Found OpenGL: /usr/local/lib/libGL.so -- Found lupdate: /usr/local/bin/lupdate-qt4 -- Found lrelease: /usr/local/bin/lrelease-qt4 -- Found lconvert: /usr/local/bin/lconvert -- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so -- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found X11: /usr/local/lib/libX11.so -- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0") -- Cannot find Eigen3, trying Eigen2 -- Found Eigen2: /usr/local/include/eigen2 (Required is at least version "2.0.0") -- Found ZLIB: /usr/lib/libz.so (found version "1.2.8") -- Found PkgConfig: pkgconf (found version "0.28") -- Checking for module 'openbabel-2.0>=2.3.0' -- Found openbabel-2.0, version 2.3.2 -- Found OpenBabel 2.3 or later: openbabel -- Found OpenBabel2 executable: /usr/local/bin/babel -- Found Git revision is: -- Building released version. -- Searching for python dependencies... -- [1/5] Boost Python -- Boost version: 1.60.0 -- Found the following Boost libraries: -- python -- Boost Python found... -- [2/5] Python Libraries -- Found PythonLibs: /usr/local/lib/libpython2.7.so -- [3/5] Python Interpreter -- Found PythonInterp: /usr/local/bin/python2.7 (found version "2.7.11") -- [4/5] Numpy Module -- Numpy headers found -- [5/5] SIP Module -- SIP version 266496 found -- Found SIP: /wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -- All python dependencies found - Python support enabled -- Threaded OpenGL rendering not enabled -- RPath support enabled for installed binaries and libraries -- Setting new boost python libraries -- Enabled python terminal -- Found Qt4: /usr/local/bin/qmake-qt4 (found suitable version "4.8.7", minimum required is "4.6") -- Linking in static plugins: bsdyengine;navigatetool;elementcolor -- Python site-packages directory: /usr/local/lib/python2.7/site-packages -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- docbook tools not found, doc targets disabled -- Configuring done CMake Warning (dev) in libavogadro/src/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "avogadro" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: openbabel;/usr/local/lib/qt4/libQtOpenGL.so;/usr/local/lib/qt4/libQtGui.so;/usr/local/lib/qt4/libQtCore.so;/usr/local/lib/libGLU.so;/usr/local/lib/libGL.so;/usr/local/lib/libpython2.7.so;/usr/local/lib/libboost_python.so;bsdyengine;navigatetool;elementcolor LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) in libavogadro/src/extensions/surfaces/openqube/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "OpenQube" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: $<$>:/usr/local/lib/qt4/libQtCore.so>;$<$:/usr/local/lib/qt4/libQtCore.so> LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 =========================================================================== =================================================== ===> Building for avogadro-1.1.1_3 /usr/local/bin/cmake -H/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 -B/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/CMakeFiles /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- /usr/bin/make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/depend --- libavogadro/src/engines/moc_bsdyengine.cxx --- --- libavogadro/src/engines/ui_bsdysettingswidget.h --- --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- /usr/bin/make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- /usr/bin/make -f libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build.make libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/depend --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/depend --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/DependInfo.cmake --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- /usr/bin/make -f libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build.make libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/depend --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- /usr/bin/make -f libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build.make libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/depend --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- [ 1%] Generating ui_bsdysettingswidget.h --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- Scanning dependencies of target spglib --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/bin/uic-qt4 -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines/ui_bsdysettingswidget.h /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines/bsdysettingswidget.ui --- libavogadro/src/engines/moc_bsdyengine.cxx --- [ 1%] Generating moc_bsdyengine.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines/moc_bsdyengine.cxx_parameters --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- --- libavogadro/src/tools/moc_navigatetool.cxx --- --- libavogadro/src/tools/ui_navigatesettingswidget.h --- --- libavogadro/src/tools/moc_navigatetool.cxx --- [ 1%] Generating moc_navigatetool.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/moc_navigatetool.cxx_parameters --- libavogadro/src/tools/qrc_navigatetool.cxx --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/depend --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/DependInfo.cmake --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- /usr/bin/make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/moc_basisset.cxx --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- /usr/bin/make -f libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build.make libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- --- libavogadro/src/colors/moc_elementcolor.cxx --- --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- --- libavogadro/src/tools/ui_navigatesettingswidget.h --- [ 1%] Generating ui_navigatesettingswidget.h --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- [ 1%] Generating moc_basisset.cxx --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- --- libavogadro/src/tools/qrc_navigatetool.cxx --- [ 1%] Generating qrc_navigatetool.cxx --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/cell.c.o --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/moc_basisset.cxx_parameters --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- --- libavogadro/src/tools/ui_navigatesettingswidget.h --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/bin/uic-qt4 -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/ui_navigatesettingswidget.h /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/navigatesettingswidget.ui --- libavogadro/src/tools/qrc_navigatetool.cxx --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/bin/rcc -name navigatetool -o 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-isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/spglib.dir/cell.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib/cell.c --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- /usr/bin/make -f libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build.make libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/moc_gaussianset.cxx --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/debug.c.o --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Bitmap.c.o --- --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- [ 1%] Generating moc_elementcolor.cxx --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- [ 1%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/debug.c.o --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- [ 1%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Bitmap.c.o --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors/moc_elementcolor.cxx_parameters --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- [ 1%] Generating moc_gaussianset.cxx --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cc -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/us--- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/spglib.dir/debug.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib/debug.c --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- r/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/tubegen.dir/Bitmap.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen/Bitmap.c --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/moc_gaussianset.cxx_parameters --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Core3DMath.c.o --- [ 1%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Core3DMath.c.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cc -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/tubegen.dir/Core3DMath.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen/Core3DMath.c --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/moc_slaterset.cxx --- [ 1%] Generating moc_slaterset.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/moc_slaterset.cxx_parameters --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/hall_symbol.c.o --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/eprintf.c.o --- --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- [ 1%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/eprintf.c.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cc -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/tubegen.dir/eprintf.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen/eprintf.c --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors/CMakeFiles/elementcolor.dir/DependInfo.cmake --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- [ 1%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/hall_symbol.c.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/spglib.dir/hall_symbol.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib/hall_symbol.c --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 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/usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/spglib.dir/lattice.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib/lattice.c --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/depend --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube 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libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/mathfunc.c.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/spglib.dir/mathfunc.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib/mathfunc.c --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- /usr/bin/make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/build --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Cell.cpp.o --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/pointgroup.c.o --- --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- [ 1%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Cell.cpp.o --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- Scanning dependencies of target navigatetool --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/u--- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- /usr/bin/make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/build --- libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/all --- sr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/tubegen.dir/Cell.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/swcntbuilder/tubegen/Cell.cpp --- libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/all --- [ 1%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/pointgroup.c.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_PYTHON -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -w -o CMakeFiles/spglib.dir/pointgroup.c.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/crystallography/spglib/pointgroup.c --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/all --- --- libavogadro/src/colors/CMakeFiles/elementcolor.dir/elementcolor.cpp.o --- [ 1%] Building CXX object 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libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- --- libavogadro/src/engines/bsdyengine.a --- [ 4%] Linking CXX static library bsdyengine.a cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/bin/cmake -P CMakeFiles/bsdyengine.dir/cmake_clean_target.cmake --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- --- libavogadro/src/tools/navigatetool.a --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/molecule.cpp.o --- --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/bsdyengine.dir/link.txt --verbose=1 --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- [ 4%] Linking CXX static library navigatetool.a --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- /usr/bin/ar qc bsdyengine.a CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/bin/cmake -P CMakeFiles/navigatetool.dir/cmake_clean_target.cmake --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- /usr/bin/ranlib bsdyengine.a --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- [ 4%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/molecule.cpp.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_PYTHON -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -o CMakeFiles/OpenQube.dir/molecule.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/molecule.cpp --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/navigatetool.dir/link.txt --verbose=1 --- libavogadro/src/engines/CMakeFiles/bsdyengine.dir/all --- [ 4%] Built target bsdyengine --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/mopacaux.cpp.o --- --- libavogadro/src/tools/CMakeFiles/navigatetool.dir/all --- /usr/bin/ar qc navigatetool.a CMakeFiles/navigatetool.dir/navigatetool.cpp.o CMakeFiles/navigatetool.dir/eyecandy.cpp.o CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o /usr/bin/ranlib navigatetool.a [ 4%] Built target navigatetool --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/slaterset.cpp.o --- --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/mopacaux.cpp.o --- [ 4%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/mopacaux.cpp.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_PYTHON -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/--- libavogadro/src/CMakeFiles/avogadro.dir/all --- /usr/bin/make -f libavogadro/src/CMakeFiles/avogadro.dir/build.make libavogadro/src/CMakeFiles/avogadro.dir/depend --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -o CMakeFiles/OpenQube.dir/mopacaux.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/mopacaux.cpp --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/slaterset.cpp.o --- [ 4%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/slaterset.cpp.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_PYTHON -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -o CMakeFiles/OpenQube.dir/slaterset.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/slaterset.cpp --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/moc_animation.cxx --- [ 5%] Generating moc_animation.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_animation.cxx_parameters --- libavogadro/src/moc_atom.cxx --- [ 5%] Generating moc_atom.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_atom.cxx_parameters --- libavogadro/src/moc_bond.cxx --- --- libavogadro/src/moc_color.cxx --- --- libavogadro/src/moc_bond.cxx --- [ 5%] Generating moc_bond.cxx --- libavogadro/src/moc_color.cxx --- [ 5%] Generating moc_color.cxx --- libavogadro/src/moc_bond.cxx --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_bond.cxx_parameters --- libavogadro/src/moc_color.cxx --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_color.cxx_parameters --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_basisset.cxx.o --- --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/moc_colorbutton.cxx --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- [ 5%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_basisset.cxx.o --- libavogadro/src/CMakeFiles/avogadro.dir/all --- [ 5%] Generating moc_colorbutton.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_colorbutton.cxx_parameters --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_PYTHON -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces -O2 -pipe -idirafter /usr/local/include/eigen2 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@/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_dockextension.cxx_parameters --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o --- [ 5%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_PYTHON -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -o CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/moc_gaussianset.cxx --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/moc_dockwidget.cxx --- [ 5%] Generating moc_dockwidget.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_dockwidget.cxx_parameters --- libavogadro/src/moc_elementdetail_p.cxx --- [ 5%] Generating moc_elementdetail_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_elementdetail_p.cxx_parameters --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o --- [ 6%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_PYTHON -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/wrkdirs/usr/ports/science/avogadro/work/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -fPIC -o CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube/moc_slaterset.cxx --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/moc_elementtranslator.cxx --- [ 7%] Generating moc_elementtranslator.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_elementtranslator.cxx_parameters --- libavogadro/src/moc_engine.cxx --- --- libavogadro/src/moc_extension.cxx --- --- libavogadro/src/moc_engine.cxx --- [ 7%] Generating moc_engine.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_engine.cxx_parameters --- libavogadro/src/moc_extension.cxx --- [ 7%] Generating moc_extension.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_extension.cxx_parameters --- libavogadro/src/moc_fragment.cxx --- --- libavogadro/src/moc_glwidget.cxx --- --- libavogadro/src/moc_fragment.cxx --- [ 7%] Generating moc_fragment.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_fragment.cxx_parameters --- libavogadro/src/moc_glwidget.cxx --- [ 7%] Generating moc_glwidget.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_glwidget.cxx_parameters --- libavogadro/src/moc_mesh.cxx --- --- libavogadro/src/moc_meshgenerator.cxx --- --- libavogadro/src/moc_mesh.cxx --- [ 7%] Generating moc_mesh.cxx --- libavogadro/src/moc_meshgenerator.cxx --- [ 7%] Generating moc_meshgenerator.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_meshgenerator.cxx_parameters --- libavogadro/src/moc_mesh.cxx --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_mesh.cxx_parameters --- libavogadro/src/moc_molecule.cxx --- --- libavogadro/src/moc_moleculefile.cxx --- --- libavogadro/src/moc_periodictablescene_p.cxx --- --- libavogadro/src/moc_periodictableview.cxx --- --- libavogadro/src/moc_moleculefile.cxx --- [ 7%] Generating moc_moleculefile.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_moleculefile.cxx_parameters --- libavogadro/src/moc_molecule.cxx --- [ 7%] Generating moc_molecule.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_molecule.cxx_parameters --- libavogadro/src/moc_periodictablescene_p.cxx --- [ 8%] Generating moc_periodictablescene_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_periodictablescene_p.cxx_parameters --- libavogadro/src/moc_plotwidget.cxx --- --- libavogadro/src/moc_periodictableview.cxx --- [ 8%] Generating moc_periodictableview.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_periodictableview.cxx_parameters --- libavogadro/src/moc_plugin.cxx --- [ 8%] Generating moc_plugin.cxx --- libavogadro/src/moc_plotwidget.cxx --- [ 8%] Generating moc_plotwidget.cxx --- libavogadro/src/moc_pluginmanager.cxx --- --- libavogadro/src/moc_plotwidget.cxx --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_plotwidget.cxx_parameters --- libavogadro/src/moc_primitive.cxx --- --- libavogadro/src/moc_protein.cxx --- --- libavogadro/src/moc_pluginmanager.cxx --- [ 8%] Generating moc_pluginmanager.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_pluginmanager.cxx_parameters --- libavogadro/src/moc_plugin.cxx --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_plugin.cxx_parameters --- libavogadro/src/moc_protein.cxx --- [ 8%] Generating moc_protein.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_protein.cxx_parameters --- libavogadro/src/moc_readfilethread_p.cxx --- --- libavogadro/src/moc_primitive.cxx --- [ 8%] Generating moc_primitive.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_primitive.cxx_parameters --- libavogadro/src/moc_residue.cxx --- --- libavogadro/src/moc_textmatrixeditor.cxx --- --- libavogadro/src/moc_tool.cxx --- [ 8%] Generating moc_tool.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_tool.cxx_parameters --- libavogadro/src/moc_toolgroup.cxx --- --- libavogadro/src/moc_residue.cxx --- [ 9%] Generating moc_residue.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_residue.cxx_parameters --- libavogadro/src/moc_readfilethread_p.cxx --- [ 9%] Generating moc_readfilethread_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_readfilethread_p.cxx_parameters --- libavogadro/src/moc_textmatrixeditor.cxx --- [ 9%] Generating moc_textmatrixeditor.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_textmatrixeditor.cxx_parameters --- libavogadro/src/moc_zmatrix.cxx --- --- libavogadro/src/moc_pythonengine_p.cxx --- --- libavogadro/src/moc_zmatrix.cxx --- [ 9%] Generating moc_zmatrix.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_zmatrix.cxx_parameters --- libavogadro/src/moc_toolgroup.cxx --- [ 9%] Generating moc_toolgroup.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_toolgroup.cxx_parameters --- libavogadro/src/moc_pythonerror.cxx --- --- libavogadro/src/moc_pythonengine_p.cxx --- [ 9%] Generating moc_pythonengine_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_pythonengine_p.cxx_parameters --- libavogadro/src/moc_pythonextension_p.cxx --- --- libavogadro/src/moc_pythonerror.cxx --- [ 9%] Generating moc_pythonerror.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_pythonerror.cxx_parameters --- libavogadro/src/moc_pythontool_p.cxx --- --- libavogadro/src/libavogadro_vi.qm --- --- libavogadro/src/moc_pythonextension_p.cxx --- [ 9%] Generating moc_pythonextension_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_pythonextension_p.cxx_parameters --- libavogadro/src/libavogadro_nb.qm --- --- libavogadro/src/libavogadro_vi.qm --- [ 9%] Generating libavogadro_vi.qm --- libavogadro/src/libavogadro_hu.qm --- --- libavogadro/src/moc_pythontool_p.cxx --- [ 9%] Generating moc_pythontool_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/moc-qt4 @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_pythontool_p.cxx_parameters --- libavogadro/src/libavogadro_vi.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lconvert -i /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/i18n/libavogadro/vi.po -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_vi.ts --- libavogadro/src/libavogadro_nb.qm --- [ 10%] Generating libavogadro_nb.qm cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lconvert -i /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/i18n/libavogadro/nb.po -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_nb.ts --- libavogadro/src/libavogadro_hu.qm --- [ 10%] Generating libavogadro_hu.qm cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lconvert -i /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/i18n/libavogadro/hu.po -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_hu.ts --- libavogadro/src/libavogadro_et.qm --- --- libavogadro/src/libavogadro_nb.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lupdate-qt4 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -silent -noobsolete -ts /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_nb.ts --- libavogadro/src/libavogadro_et.qm --- [ 10%] Generating libavogadro_et.qm --- libavogadro/src/libavogadro_vi.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lupdate-qt4 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -silent -noobsolete -ts /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_vi.ts --- libavogadro/src/libavogadro_et.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lconvert -i /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/i18n/libavogadro/et.po -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_et.ts --- libavogadro/src/libavogadro_vi.qm --- Scanning directory '/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src'... --- libavogadro/src/libavogadro_hu.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lupdate-qt4 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -silent -noobsolete -ts /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_hu.ts --- libavogadro/src/libavogadro_nb.qm --- Scanning directory '/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src'... --- libavogadro/src/libavogadro_hu.qm --- Scanning directory '/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src'... --- libavogadro/src/libavogadro_et.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lupdate-qt4 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -silent -noobsolete -ts /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_et.ts Scanning directory '/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src'... --- libavogadro/src/libavogadro_nb.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lrelease-qt4 -compress -removeidentical -silent /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_nb.ts -qm /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_nb.qm --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- --- lib/libavogadro_OpenQube.so.0.1.0 --- --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/libavogadro_uk.qm --- [ 10%] Generating libavogadro_uk.qm cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lconvert -i /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/i18n/libavogadro/uk.po -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_uk.ts --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- [ 10%] Linking CXX shared library ../../../../../lib/libavogadro_OpenQube.so cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/OpenQube.dir/link.txt --verbose=1 --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/libavogadro_vi.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lrelease-qt4 -compress -removeidentical -silent /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_vi.ts -qm /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_vi.qm --- libavogadro/src/moc_pythontool_p.cxx --- usr/local/include/boost/type_traits/detail/has_binary_operator.hp:50: Parse error at "BOOST_JOIN" --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- /usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fstack-protector -fno-strict-aliasing -L/usr/local/lib -fstack-protector -shared -Wl,-soname,libavogadro_OpenQube.so.0 -o ../../../../../lib/libavogadro_OpenQube.so.0.1.0 CMakeFiles/OpenQube.dir/atom.cpp.o CMakeFiles/OpenQube.dir/basisset.cpp.o CMakeFiles/OpenQube.dir/basissetloader.cpp.o CMakeFiles/OpenQube.dir/cube.cpp.o CMakeFiles/OpenQube.dir/gamessukout.cpp.o CMakeFiles/OpenQube.dir/gamessus.cpp.o CMakeFiles/OpenQube.dir/gaussianfchk.cpp.o CMakeFiles/OpenQube.dir/gaussianset.cpp.o CMakeFiles/OpenQube.dir/molden.cpp.o CMakeFiles/OpenQube.dir/molecule.cpp.o CMakeFiles/OpenQube.dir/mopacaux.cpp.o CMakeFiles/OpenQube.dir/slaterset.cpp.o CMakeFiles/OpenQube.dir/moc_basisset.cxx.o CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o -L/usr/local/lib /usr/local/lib/qt4/libQtCore.so -Wl,-rpath,/usr/local/lib:/usr/local/lib/qt4: --- libavogadro/src/CMakeFiles/avogadro.dir/all --- *** [libavogadro/src/moc_pythontool_p.cxx] Error code 1 make[3]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 --- libavogadro/src/libavogadro_uk.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lupdate-qt4 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -silent -noobsolete -ts /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_uk.ts Scanning directory '/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src'... --- libavogadro/src/libavogadro_hu.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lrelease-qt4 -compress -removeidentical -silent /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_hu.ts -qm /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_hu.qm --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/extensions/surfaces/openqube && /usr/local/bin/cmake -E cmake_symlink_library ../../../../../lib/libavogadro_OpenQube.so.0.1.0 ../../../../../lib/libavogadro_OpenQube.so.0 ../../../../../lib/libavogadro_OpenQube.so --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/libavogadro_et.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lrelease-qt4 -compress -removeidentical -silent /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_et.ts -qm /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_et.qm --- libavogadro/src/moc_pythonextension_p.cxx --- usr/local/include/boost/type_traits/detail/has_binary_operator.hp:50: Parse error at "BOOST_JOIN" --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- A failure has been detected in another branch of the parallel make make[3]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 --- libavogadro/src/CMakeFiles/avogadro.dir/all --- *** [libavogadro/src/moc_pythonextension_p.cxx] Error code 1 make[3]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 --- libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all --- *** [libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/all] Error code 2 make[2]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 --- libavogadro/src/CMakeFiles/avogadro.dir/all --- --- libavogadro/src/moc_pythonengine_p.cxx --- usr/local/include/boost/type_traits/detail/has_binary_operator.hp:50: Parse error at "BOOST_JOIN" *** [libavogadro/src/moc_pythonengine_p.cxx] Error code 1 make[3]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 --- libavogadro/src/libavogadro_uk.qm --- cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lrelease-qt4 -compress -removeidentical -silent /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_uk.ts -qm /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_uk.qm 3 errors make[3]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 *** [libavogadro/src/CMakeFiles/avogadro.dir/all] Error code 2 make[2]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 2 errors make[2]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 *** [all] Error code 2 make[1]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 1 error make[1]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped in /usr/ports/science/avogadro ====>> Cleaning up wrkdir ===> Cleaning for avogadro-1.1.1_3 build of science/avogadro ended at Mon Jan 11 12:26:33 PST 2016 build time: 00:02:34 !!! build failure encountered !!!