Building seaview-4.5.1,1.txz (origin /buildshare/ports/355755/biology/seaview) for powerpc-10-0 on XXX slot1: created x distfiles/ x distfiles/seaview_4.5.1.tar.gz x packages/ x packages/python27-2.7.6_4.txz x packages/libpthread-stubs-0.3_4.txz x packages/libXdamage-1.1.4_2.txz x packages/xextproto-7.3.0.txz x packages/xineramaproto-1.2.1.txz x packages/libGLU-9.0.0.txz x packages/cmake-2.8.12.1_4.txz x packages/xtrans-1.3.4_1.txz x packages/fixesproto-5.0.txz x packages/kbproto-1.0.6.txz x packages/libXfixes-5.0.1_2.txz x packages/libXinerama-1.1.3_2,1.txz x packages/libxcb-1.10_2.txz x packages/libXau-1.0.8_2.txz x packages/libXxf86vm-1.1.3_2.txz x packages/py27-libxml2-2.9.1.txz x packages/damageproto-1.2.1.txz x packages/libgcrypt-1.5.3_2.txz x packages/perl5-5.16.3_10.txz x packages/xf86bigfontproto-1.2.0.txz x packages/xproto-7.0.25.txz x packages/python2-2_2.txz x packages/xcmiscproto-1.2.2.txz x packages/inputproto-2.3.txz x packages/libxml2-2.9.1_1.txz x packages/fontconfig-2.11.0_3,1.txz x packages/expat-2.1.0.txz x packages/libXdmcp-1.1.1_2.txz x packages/libxslt-1.1.28_3.txz x packages/freetype2-2.5.3_2.txz x packages/pdflib-7.0.5_2.txz x packages/gettext-0.18.3.1_1.txz x packages/jpeg-8_5.txz x packages/png-1.5.18.txz x packages/libXext-1.3.2_2,1.txz x packages/libcheck-0.9.12.txz x packages/bison-2.7.1,1.txz x packages/pciids-20140526.txz x packages/py27-setuptools27-2.0.1.txz x packages/xorg-macros-1.19.0.txz x packages/cmake-modules-2.8.12.1_1.txz x packages/libtool-2.4.2_3.txz x packages/m4-1.4.17_1,1.txz x packages/makedepend-1.0.5,1.txz x packages/fltk-1.3.2.txz x packages/xcb-proto-1.10_1.txz x packages/pkgconf-0.9.5.txz x packages/libXft-2.3.1_2.txz x packages/libXrender-0.9.8_2.txz x packages/pkg-1.2.7_2.txz x packages/gmake-3.82_1.txz x packages/xf86vidmodeproto-2.3.1.txz x packages/libX11-1.6.2_2,1.txz x packages/glproto-1.4.17.txz x packages/libpciaccess-0.13.2_2.txz x packages/renderproto-0.11.1.txz x packages/libdrm-2.4.17_1.txz x packages/dri2proto-2.8.txz x packages/bigreqsproto-1.1.2.txz x packages/libgpg-error-1.13.txz x packages/libGL-7.6.1_4.txz ELF ldconfig path: /lib /usr/lib /usr/lib/compat Make depends ===> seaview-4.5.1,1 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /buildshare/ports/355755/ports-mgmt/pkg ===> Installing existing package /packages/pkg-1.2.7_2.txz Installing pkg-1.2.7_2... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of seaview-4.5.1,1 ===> seaview-4.5.1,1 depends on shared library: libfltk.so - not found ===> Verifying for libfltk.so in /buildshare/ports/355755/x11-toolkits/fltk ===> Installing existing package /packages/fltk-1.3.2.txz Installing fltk-1.3.2...Installing jpeg-8_5... done Installing libGLU-9.0.0...Installing libGL-7.6.1_4...Installing dri2proto-2.8... done Installing expat-2.1.0... done Installing libX11-1.6.2_2,1...Installing kbproto-1.0.6... done Installing libXau-1.0.8_2...Installing xproto-7.0.25... done done Installing libXdmcp-1.1.1_2... done Installing libxcb-1.10_2...Installing libpthread-stubs-0.3_4... done Installing libxml2-2.9.1_1... done done done Installing libXdamage-1.1.4_2...Installing damageproto-1.2.1... done Installing libXfixes-5.0.1_2...Installing fixesproto-5.0... done done done Installing libXext-1.3.2_2,1...Installing xextproto-7.3.0... done done Installing libXxf86vm-1.1.3_2...Installing xf86vidmodeproto-2.3.1... done done Installing libdrm-2.4.17_1...Installing libpciaccess-0.13.2_2...Installing pciids-20140526... done done done done done Installing libXft-2.3.1_2...Installing fontconfig-2.11.0_3,1...Installing freetype2-2.5.3_2... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs /usr/local/lib/X11/fonts/local: caching, new cache contents: 0 fonts, 0 dirs /root/.local/share/fonts: skipping, no such directory /root/.fonts: skipping, no such directory /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs /root/.local/share/fonts: skipping, no such directory /root/.fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory /root/.cache/fontconfig: not cleaning non-existent cache directory /root/.fontconfig: not cleaning non-existent cache directory fc-cache: succeeded done Installing libXrender-0.9.8_2...Installing renderproto-0.11.1... done done done Installing png-1.5.18... done done ===> Returning to build of seaview-4.5.1,1 ===> seaview-4.5.1,1 depends on shared library: libpdf.so - not found ===> Verifying for libpdf.so in /buildshare/ports/355755/print/pdflib ===> Installing existing package /packages/pdflib-7.0.5_2.txz Installing pdflib-7.0.5_2... done ===> Returning to build of seaview-4.5.1,1 ===> seaview-4.5.1,1 depends on executable: gmake - not found ===> Verifying install for gmake in /buildshare/ports/355755/devel/gmake ===> Installing existing package /packages/gmake-3.82_1.txz Installing gmake-3.82_1...Installing gettext-0.18.3.1_1... done done ===> Returning to build of seaview-4.5.1,1 ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xft.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xinerama.pc - not found ===> Verifying install for /usr/local/libdata/pkgconfig/xinerama.pc in /buildshare/ports/355755/x11/libXinerama ===> Installing existing package /packages/libXinerama-1.1.3_2,1.txz Installing libXinerama-1.1.3_2,1...Installing xineramaproto-1.2.1... done done ===> Returning to build of seaview-4.5.1,1 ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xft.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xinerama.pc - found Make install ===> seaview-4.5.1,1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by seaview-4.5.1,1 for building ===> Extracting for seaview-4.5.1,1 => SHA256 Checksum OK for seaview_4.5.1.tar.gz. ===> Patching for seaview-4.5.1,1 ===> seaview-4.5.1,1 depends on executable: gmake - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xft.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xinerama.pc - found ===> seaview-4.5.1,1 depends on shared library: libfltk.so - found (/usr/local/lib/libfltk.so.1.3) ===> seaview-4.5.1,1 depends on shared library: libpdf.so - found (/usr/local/lib/libpdf.so.6) ===> Configuring for seaview-4.5.1,1 ===> Building for seaview-4.5.1,1 gmake[1]: Entering directory `/obj/buildshare/ports/355755/biology/seaview/work/seaview' c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser seaview.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser custom.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser use_mase_files.cxx use_mase_files.cxx: In function 'int read_fasta_align(const char*, char***, char***, char***, char**, char**, int)': use_mase_files.cxx:375: warning: comparison is always true due to limited range of data type c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser regions.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser load_seq.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser align.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser xfmatpt.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser comlines.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser resource.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser nexus.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser viewasprots.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser racnuc_fetch.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser concatenate.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser statistics.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser trees.cxx trees.cxx: In function 'void trees_callback(Fl_Widget*, void*)': trees.cxx:156: warning: comparison is always true due to limited range of data type c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser treedraw.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser addbootstrap.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser least_squares_brl.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser pseudoterminal.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser unrooted.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser pdf_or_ps.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser svg.cxx c++ -c -O2 -pipe -fno-strict-aliasing -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser threads.cxx c++ -c -I. -Dunix -O2 -pipe -fno-strict-aliasing -I/usr/local/include -Icsrc -I. -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DFl_Native_File_Chooser=mgFl_Native_File_Chooser FL/Fl_Native_File_Chooser_FLTK.cxx cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/raa_acnuc.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/parser.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/md5.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/zsockr.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/misc_acnuc.c csrc/misc_acnuc.c: In function 'gets_no_echo': csrc/misc_acnuc.c:702: warning: comparison is always false due to limited range of data type cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/dnapars.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/protpars.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/lwl.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/bionj.c cc -c -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -Icsrc csrc/phyml_util.c c++ -o seaview seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o Fl_Native_File_Chooser_FLTK.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o lwl.o bionj.o phyml_util.o \ -L/usr/local/lib -lfltk_images -lfltk \ -lXft -lXext -lfontconfig -ljpeg -lpng -lXinerama -L/usr/local/lib -lpdf \ -lX11 -lm -lz -pthread gmake[1]: Leaving directory `/obj/buildshare/ports/355755/biology/seaview/work/seaview' ===> Staging for seaview-4.5.1,1 ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xft.pc - found ===> seaview-4.5.1,1 depends on file: /usr/local/libdata/pkgconfig/xinerama.pc - found ===> Generating temporary packing list (cd /obj/buildshare/ports/355755/biology/seaview/work/seaview && install -s -o root -g wheel -m 555 seaview /obj/buildshare/ports/355755/biology/seaview/work/stage/usr/local/bin) (cd /obj/buildshare/ports/355755/biology/seaview/work/seaview && install -o root -g wheel -m 444 seaview.1 /obj/buildshare/ports/355755/biology/seaview/work/stage/usr/local/man/man1) (cd /obj/buildshare/ports/355755/biology/seaview/work/seaview && install -o root -g wheel -m 444 seaview.html /obj/buildshare/ports/355755/biology/seaview/work/stage/usr/local/share/seaview) (cd /obj/buildshare/ports/355755/biology/seaview/work/seaview && install -o root -g wheel -m 444 seaview.xpm /obj/buildshare/ports/355755/biology/seaview/work/stage/usr/local/share/pixmaps) ====> Compressing man pages (compress-man) ===> Installing for seaview-4.5.1,1 ===> Checking if biology/seaview already installed ===> Registering installation for seaview-4.5.1,1 Installing seaview-4.5.1,1... done Make package ===> Building package for seaview-4.5.1,1 slot1: removed