Building py27-h5py-2.2.1_2.txz (origin /buildshare/ports/355755/science/py-h5py) for powerpc-10-0 on XXX
slot1: created
x distfiles/
x distfiles/h5py-2.2.1.tar.gz
x packages/
x packages/pkg-1.2.7_2.txz
x packages/mpfr-3.1.2_2.txz
x packages/python27-2.7.6_4.txz
x packages/blas-3.4.2_2.txz
x packages/py27-numpy-1.8.0_2,1.txz
x packages/hdf5-1.8.13_1.txz
x packages/gmake-3.82_1.txz
x packages/gettext-0.18.3.1_1.txz
x packages/suitesparse-4.0.2_3.txz
x packages/gmp-5.1.3_2.txz
x packages/py27-setuptools27-2.0.1.txz
x packages/m4-1.4.17_1,1.txz
x packages/perl5-5.16.3_10.txz
x packages/bison-2.7.1,1.txz
x packages/lapack-3.4.2_2.txz
x packages/py27-nose-1.3.0_1.txz
x packages/mpc-1.0.2.txz
x packages/gcc-4.7.3_1.txz
x packages/binutils-2.24.txz
ELF ldconfig path: /lib /usr/lib /usr/lib/compat
Make depends
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /buildshare/ports/355755/ports-mgmt/pkg
===>   Installing existing package /packages/pkg-1.2.7_2.txz
Installing pkg-1.2.7_2... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of py27-h5py-2.2.1_2
===>   py27-h5py-2.2.1_2 depends on shared library: libhdf5.so
 - not found
===>    Verifying for libhdf5.so in /buildshare/ports/355755/science/hdf5
===>   Installing existing package /packages/hdf5-1.8.13_1.txz
Installing hdf5-1.8.13_1... done
===>   Returning to build of py27-h5py-2.2.1_2
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found
===>    Verifying install for /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py in /buildshare/ports/355755/math/py-numpy
===>   Installing existing package /packages/py27-numpy-1.8.0_2,1.txz
Installing py27-numpy-1.8.0_2,1...Installing blas-3.4.2_2...Installing gcc-4.7.3_1...Installing binutils-2.24...Installing gettext-0.18.3.1_1... done
 done
Installing gmp-5.1.3_2... done
Installing mpc-1.0.2...Installing mpfr-3.1.2_2... done
 done
 done
 done
Installing lapack-3.4.2_2... done
Installing py27-nose-1.3.0_1...Installing py27-setuptools27-2.0.1...Installing python27-2.7.6_4... done
 done
 done
Installing suitesparse-4.0.2_3... done
 done
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc47

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
====
Note that some of the standard modules are provided as separate
ports since they require extra dependencies:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

Install them as needed.
====
===>   Returning to build of py27-h5py-2.2.1_2
===>   py27-h5py-2.2.1_2 depends on package: py27-setuptools27>0 - found
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/bin/python2.7 - found
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found
===>   py27-h5py-2.2.1_2 depends on package: py27-setuptools27>0 - found
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/bin/python2.7 - found
Make install
===>  License BSD accepted by the user
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/sbin/pkg - found
===> Fetching all distfiles required by py27-h5py-2.2.1_2 for building
===>  Extracting for py27-h5py-2.2.1_2
=> SHA256 Checksum OK for h5py-2.2.1.tar.gz.
===>  Patching for py27-h5py-2.2.1_2
===>  Applying FreeBSD patches for py27-h5py-2.2.1_2
/usr/bin/sed -i.bak -e 's|%%LOCALBASE%%|/usr/local|'  /obj/buildshare/ports/355755/science/py-h5py/work/h5py-2.2.1/setup.py
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found
===>   py27-h5py-2.2.1_2 depends on package: py27-setuptools27>0 - found
===>   py27-h5py-2.2.1_2 depends on file: /usr/local/bin/python2.7 - found
===>   py27-h5py-2.2.1_2 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so.8.0.2)
===>  Configuring for py27-h5py-2.2.1_2
Cython not present; building for HDF5 1.8.4+
running config
===>  Building for py27-h5py-2.2.1_2
Cython not present; building for HDF5 1.8.4+
running build
running build_py
creating build
creating build/lib.freebsd-10.0-STABLE-powerpc-2.7
creating build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/ipy_completer.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/__init__.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/version.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/highlevel.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
creating build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/group.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/files.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/__init__.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/dataset.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/base.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/datatype.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/selections.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/filters.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/selections2.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/dims.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
copying h5py/_hl/attrs.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl
creating build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_file.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/common.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/__init__.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_base.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_attrs.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_group.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_dataset.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_datatype.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_attrs_data.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_dimension_scales.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_slicing.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
copying h5py/_hl/tests/test_selections.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_hl/tests
creating build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/lowtest
copying h5py/lowtest/test_h5f.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/lowtest
copying h5py/lowtest/__init__.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/lowtest
copying h5py/lowtest/test_h5.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/lowtest
copying h5py/lowtest/test_objects.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/lowtest
copying h5py/lowtest/test_h5t.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/lowtest
copying h5py/lowtest/test_h5p.py -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/lowtest
copying h5py/h5s.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/_errors.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/defs.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5d.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5ac.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5r.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/utils.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5l.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5z.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5o.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/_conv.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5p.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5i.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5g.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5ds.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5f.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5fd.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/_proxy.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5t.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5a.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/h5.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
copying h5py/_objects.pyx -> build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py
running build_ext
building 'h5py.defs' extension
creating build/temp.freebsd-10.0-STABLE-powerpc-2.7
creating build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -DH5_USE_16_API -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/obj/buildshare/ports/355755/science/py-h5py/work/h5py-2.2.1/lzf -I/usr/local/include -I/usr/local/include/python2.7 -c h5py/defs.c -o build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/defs.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from h5py/api_compat.h:21,
                 from h5py/defs.c:259:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
h5py/defs.c: In function '__pyx_f_4h5py_4defs_H5Lunpack_elink_val':
h5py/defs.c:21462: warning: passing argument 4 of 'H5Lunpack_elink_val' from incompatible pointer type
h5py/defs.c:21462: warning: passing argument 5 of 'H5Lunpack_elink_val' from incompatible pointer type
h5py/defs.c: In function '__pyx_f_4h5py_4defs_H5Pset_fapl_multi':
h5py/defs.c:31308: warning: passing argument 4 of 'H5Pset_fapl_multi' from incompatible pointer type
h5py/defs.c: In function '__pyx_f_4h5py_4defs_H5Sselect_elements':
h5py/defs.c:51217: warning: passing argument 4 of 'H5Sselect_elements' from incompatible pointer type
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/defs.o -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/defs.so
building 'h5py._errors' extension
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -DH5_USE_16_API -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/obj/buildshare/ports/355755/science/py-h5py/work/h5py-2.2.1/lzf -I/usr/local/include -I/usr/local/include/python2.7 -c h5py/_errors.c -o build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/_errors.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from h5py/api_compat.h:21,
                 from h5py/_errors.c:259:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
h5py/_errors.c: In function '__pyx_f_4h5py_7_errors_walk_cb':
h5py/_errors.c:631: warning: assignment discards qualifiers from pointer target type
h5py/_errors.c: In function '__pyx_f_4h5py_7_errors_set_exception':
h5py/_errors.c:839: warning: assignment discards qualifiers from pointer target type
h5py/_errors.c: In function '__pyx_pf_4h5py_7_errors_2unsilence_errors':
h5py/_errors.c:1169: warning: passing argument 1 of 'H5Eset_auto1' from incompatible pointer type
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/_errors.o -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_errors.so
building 'h5py._objects' extension
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -DH5_USE_16_API -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/obj/buildshare/ports/355755/science/py-h5py/work/h5py-2.2.1/lzf -I/usr/local/include -I/usr/local/include/python2.7 -c h5py/_objects.c -o build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/_objects.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from h5py/api_compat.h:21,
                 from h5py/_objects.c:259:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/_objects.o -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_objects.so
building 'h5py._proxy' extension
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -DH5_USE_16_API -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/obj/buildshare/ports/355755/science/py-h5py/work/h5py-2.2.1/lzf -I/usr/local/include -I/usr/local/include/python2.7 -c h5py/_proxy.c -o build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/_proxy.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from h5py/api_compat.h:21,
                 from h5py/_proxy.c:259:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
h5py/_proxy.c: In function '__pyx_f_4h5py_6_proxy_h5py_copy':
h5py/_proxy.c:2383: warning: passing argument 4 of '__pyx_f_4h5py_4defs_H5Diterate' from incompatible pointer type
h5py/_proxy.c:2404: warning: passing argument 4 of '__pyx_f_4h5py_4defs_H5Diterate' from incompatible pointer type
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/_proxy.o -L/usr/local/lib -Wl,-rpath=/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.freebsd-10.0-STABLE-powerpc-2.7/h5py/_proxy.so
building 'h5py.h5fd' extension
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -DH5_USE_16_API -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/obj/buildshare/ports/355755/science/py-h5py/work/h5py-2.2.1/lzf -I/usr/local/include -I/usr/local/include/python2.7 -c h5py/h5fd.c -o build/temp.freebsd-10.0-STABLE-powerpc-2.7/h5py/h5fd.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from h5py/api_compat.h:21,
                 from h5py/h5fd.c:259:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
h5py/h5fd.c: In function 'inith5fd':
h5py/h5fd.c:857: error: 'H5FD_MPIPOSIX' undeclared (first use in this function)
h5py/h5fd.c:857: error: (Each undeclared identifier is reported only once
h5py/h5fd.c:857: error: for each function it appears in.)
error: command 'cc' failed with exit status 1
*** Error code 1

Stop.
make: stopped in /buildshare/ports/355755/science/py-h5py