Building py27-biopython-1.60_3.txz (origin /buildshare/ports/355755/biology/py-biopython) for powerpc-10-0 on XXX
slot2: created
x distfiles/
x distfiles/biopython-1.60.tar.gz
x packages/
x packages/py27-reportlab1-1.21.2_3.txz
x packages/mpc-1.0.2.txz
x packages/py27-nose-1.3.0_1.txz
x packages/python27-2.7.6_4.txz
x packages/gettext-0.18.3.1_1.txz
x packages/pkg-1.2.7_2.txz
x packages/gmake-3.82_1.txz
x packages/m4-1.4.17_1,1.txz
x packages/bison-2.7.1,1.txz
x packages/blas-3.4.2_2.txz
x packages/gcc-4.7.3_1.txz
x packages/py27-setuptools27-2.0.1.txz
x packages/py27-numpy-1.8.0_2,1.txz
x packages/perl5-5.16.3_10.txz
x packages/binutils-2.24.txz
x packages/lapack-3.4.2_2.txz
x packages/gmp-5.1.3_2.txz
x packages/mpfr-3.1.2_2.txz
x packages/python2-2_2.txz
x packages/suitesparse-4.0.2_3.txz
ELF ldconfig path: /lib /usr/lib /usr/lib/compat
Make depends
===>   py27-biopython-1.60_3 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /buildshare/ports/355755/ports-mgmt/pkg
===>   Installing existing package /packages/pkg-1.2.7_2.txz
Installing pkg-1.2.7_2... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of py27-biopython-1.60_3
===>   py27-biopython-1.60_3 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found
===>    Verifying install for /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py in /buildshare/ports/355755/math/py-numpy
===>   Installing existing package /packages/py27-numpy-1.8.0_2,1.txz
Installing py27-numpy-1.8.0_2,1...Installing blas-3.4.2_2...Installing gcc-4.7.3_1...Installing binutils-2.24...Installing gettext-0.18.3.1_1... done
 done
Installing gmp-5.1.3_2... done
Installing mpc-1.0.2...Installing mpfr-3.1.2_2... done
 done
 done
 done
Installing lapack-3.4.2_2... done
Installing py27-nose-1.3.0_1...Installing py27-setuptools27-2.0.1...Installing python27-2.7.6_4... done
 done
 done
Installing suitesparse-4.0.2_3... done
 done
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc47

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
====
Note that some of the standard modules are provided as separate
ports since they require extra dependencies:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

Install them as needed.
====
===>   Returning to build of py27-biopython-1.60_3
===>   py27-biopython-1.60_3 depends on package: py27-setuptools27>0 - found
===>   py27-biopython-1.60_3 depends on file: /usr/local/bin/python2.7 - found
===>   py27-biopython-1.60_3 depends on executable: python2 - not found
===>    Verifying install for python2 in /buildshare/ports/355755/lang/python2
===>   Installing existing package /packages/python2-2_2.txz
Installing python2-2_2... done
===>   Returning to build of py27-biopython-1.60_3
===>   py27-biopython-1.60_3 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found
===>   py27-biopython-1.60_3 depends on package: py27-reportlab1>0 - not found
===>    Verifying install for py27-reportlab1>0 in /buildshare/ports/355755/print/py-reportlab1
===>   Installing existing package /packages/py27-reportlab1-1.21.2_3.txz
Installing py27-reportlab1-1.21.2_3... done
=======================================================
 You may need to install print/adobe-cmaps port to use
 East Asian languages.
=======================================================
===>   Returning to build of py27-biopython-1.60_3
===>   py27-biopython-1.60_3 depends on package: py27-setuptools27>0 - found
===>   py27-biopython-1.60_3 depends on file: /usr/local/bin/python2.7 - found
===>   py27-biopython-1.60_3 depends on executable: python2 - found
Make install
===>   py27-biopython-1.60_3 depends on file: /usr/local/sbin/pkg - found
===> Fetching all distfiles required by py27-biopython-1.60_3 for building
===>  Extracting for py27-biopython-1.60_3
=> SHA256 Checksum OK for biopython-1.60.tar.gz.
===>  Patching for py27-biopython-1.60_3
===>   py27-biopython-1.60_3 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found
===>   py27-biopython-1.60_3 depends on package: py27-setuptools27>0 - found
===>   py27-biopython-1.60_3 depends on file: /usr/local/bin/python2.7 - found
===>   py27-biopython-1.60_3 depends on executable: python2 - found
===>  Configuring for py27-biopython-1.60_3
running config
===>  Building for py27-biopython-1.60_3
running build
running build_py
creating build
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/SeqFeature.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/MarkovModel.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/pairwise2.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/DocSQL.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/File.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/HotRand.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/Index.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/SeqRecord.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/NaiveBayes.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/MaxEntropy.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/ParserSupport.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/Search.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/LogisticRegression.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/kNN.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/Seq.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/bgzf.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/_py3k.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
copying Bio/triefind.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align
copying Bio/Align/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align
copying Bio/Align/AlignInfo.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align
copying Bio/Align/Generic.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_TCoffee.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_Muscle.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_Prank.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_Mafft.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_Clustalw.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_Probcons.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
copying Bio/Align/Applications/_Dialign.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/PhylipIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/NexusIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/StockholmIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/Interfaces.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/FastaIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/ClustalIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
copying Bio/AlignIO/EmbossIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Alphabet
copying Bio/Alphabet/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Alphabet
copying Bio/Alphabet/Reduced.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Alphabet
copying Bio/Alphabet/IUPAC.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Alphabet
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Application
copying Bio/Application/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Application
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
copying Bio/Blast/NCBIWWW.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
copying Bio/Blast/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
copying Bio/Blast/NCBIXML.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
copying Bio/Blast/Record.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
copying Bio/Blast/Applications.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
copying Bio/Blast/ParseBlastTable.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
copying Bio/Blast/NCBIStandalone.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/CAPS
copying Bio/CAPS/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/CAPS
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Compass
copying Bio/Compass/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Compass
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Crystal
copying Bio/Crystal/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Crystal
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Data
copying Bio/Data/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Data
copying Bio/Data/CodonTable.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Data
copying Bio/Data/IUPACData.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Data
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss
copying Bio/Emboss/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss
copying Bio/Emboss/PrimerSearch.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss
copying Bio/Emboss/Primer3.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss
copying Bio/Emboss/Applications.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez
copying Bio/Entrez/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez
copying Bio/Entrez/Parser.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy
copying Bio/ExPASy/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy
copying Bio/ExPASy/Enzyme.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy
copying Bio/ExPASy/Prodoc.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy
copying Bio/ExPASy/ScanProsite.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy
copying Bio/ExPASy/Prosite.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/FSSP
copying Bio/FSSP/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/FSSP
copying Bio/FSSP/fssp_rec.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/FSSP
copying Bio/FSSP/FSSPTools.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/FSSP
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA
copying Bio/GA/Organism.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA
copying Bio/GA/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA
copying Bio/GA/Evolver.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover
copying Bio/GA/Crossover/GeneralPoint.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover
copying Bio/GA/Crossover/Uniform.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover
copying Bio/GA/Crossover/General.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover
copying Bio/GA/Crossover/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover
copying Bio/GA/Crossover/TwoPoint.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover
copying Bio/GA/Crossover/Point.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Mutation
copying Bio/GA/Mutation/General.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Mutation
copying Bio/GA/Mutation/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Mutation
copying Bio/GA/Mutation/Simple.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Mutation
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Repair
copying Bio/GA/Repair/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Repair
copying Bio/GA/Repair/Stabilizing.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Repair
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection
copying Bio/GA/Selection/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection
copying Bio/GA/Selection/Abstract.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection
copying Bio/GA/Selection/RouletteWheel.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection
copying Bio/GA/Selection/Diversity.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection
copying Bio/GA/Selection/Tournament.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank
copying Bio/GenBank/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank
copying Bio/GenBank/Record.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank
copying Bio/GenBank/utils.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank
copying Bio/GenBank/Scanner.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Geo
copying Bio/Geo/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Geo
copying Bio/Geo/Record.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Geo
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics
copying Bio/Graphics/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics
copying Bio/Graphics/Comparative.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics
copying Bio/Graphics/BasicChromosome.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics
copying Bio/Graphics/Distribution.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics
copying Bio/Graphics/DisplayRepresentation.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM
copying Bio/HMM/MarkovModel.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM
copying Bio/HMM/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM
copying Bio/HMM/DynamicProgramming.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM
copying Bio/HMM/Utilities.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM
copying Bio/HMM/Trainer.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG
copying Bio/KEGG/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Compound
copying Bio/KEGG/Compound/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Compound
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Enzyme
copying Bio/KEGG/Enzyme/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Enzyme
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Map
copying Bio/KEGG/Map/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Map
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Medline
copying Bio/Medline/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Medline
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif
copying Bio/Motif/_Motif.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif
copying Bio/Motif/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif
copying Bio/Motif/Thresholds.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers
copying Bio/Motif/Parsers/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers
copying Bio/Motif/Parsers/MAST.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers
copying Bio/Motif/Parsers/MEME.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers
copying Bio/Motif/Parsers/AlignAce.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Applications
copying Bio/Motif/Applications/_AlignAce.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Applications
copying Bio/Motif/Applications/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Applications
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork
copying Bio/NeuralNetwork/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork
copying Bio/NeuralNetwork/Training.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork
copying Bio/NeuralNetwork/StopTraining.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/BackPropagation
copying Bio/NeuralNetwork/BackPropagation/Network.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/BackPropagation
copying Bio/NeuralNetwork/BackPropagation/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/BackPropagation
copying Bio/NeuralNetwork/BackPropagation/Layer.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/BackPropagation
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene
copying Bio/NeuralNetwork/Gene/Motif.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene
copying Bio/NeuralNetwork/Gene/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene
copying Bio/NeuralNetwork/Gene/Signature.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene
copying Bio/NeuralNetwork/Gene/Pattern.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene
copying Bio/NeuralNetwork/Gene/Schema.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus
copying Bio/Nexus/Trees.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus
copying Bio/Nexus/Nodes.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus
copying Bio/Nexus/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus
copying Bio/Nexus/Nexus.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NMR
copying Bio/NMR/NOEtools.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NMR
copying Bio/NMR/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NMR
copying Bio/NMR/xpktools.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NMR
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway
copying Bio/Pathway/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep
copying Bio/Pathway/Rep/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep
copying Bio/Pathway/Rep/Graph.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep
copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep
copying Bio/Pathway/Rep/HashSet.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/HSExposure.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Structure.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/FragmentMapper.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/MMCIF2Dict.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Residue.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/StructureBuilder.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/ResidueDepth.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/DSSP.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Polypeptide.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Selection.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Dice.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/MMCIFParser.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/PDBExceptions.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/StructureAlignment.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/PSEA.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Chain.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/parse_pdb_header.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Entity.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/PDBParser.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Vector.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/AbstractPropertyMap.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Atom.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/NACCESS.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Superimposer.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/Model.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/NeighborSearch.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/PDBIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
copying Bio/PDB/PDBList.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF
copying Bio/PDB/mmCIF/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen
copying Bio/PopGen/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/Async
copying Bio/PopGen/Async/Local.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/Async
copying Bio/PopGen/Async/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/Async
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist
copying Bio/PopGen/FDist/Async.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist
copying Bio/PopGen/FDist/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist
copying Bio/PopGen/FDist/Controller.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist
copying Bio/PopGen/FDist/Utils.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/FileParser.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/EasyController.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/Controller.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/Utils.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal
copying Bio/PopGen/SimCoal/Async.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal
copying Bio/PopGen/SimCoal/Template.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal
copying Bio/PopGen/SimCoal/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal
copying Bio/PopGen/SimCoal/Cache.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal
copying Bio/PopGen/SimCoal/Controller.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction
copying Bio/Restriction/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction
copying Bio/Restriction/Restriction.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction
copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction
copying Bio/Restriction/PrintFormat.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction
copying Bio/Restriction/RanaConfig.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/_Update
copying Bio/Restriction/_Update/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/_Update
copying Bio/Restriction/_Update/RestrictionCompiler.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/_Update
copying Bio/Restriction/_Update/Update.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/_Update
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/Hie.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/Cla.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/three_to_one_dict.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/Raf.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/Dom.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/Residues.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
copying Bio/SCOP/Des.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/PhdIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/InsdcIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/PirIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/SeqXmlIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/UniprotIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/AceIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/AbiIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/IgIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/_index.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/TabIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/Interfaces.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/FastaIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/_convert.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/SffIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/SwissIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
copying Bio/SeqIO/QualityIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/CodonUsage.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/ProtParamData.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/MeltingTemp.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/ProtParam.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/CheckSum.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
copying Bio/SeqUtils/lcc.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing
copying Bio/Sequencing/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing
copying Bio/Sequencing/Ace.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing
copying Bio/Sequencing/Phd.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/Applications
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Statistics
copying Bio/Statistics/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Statistics
copying Bio/Statistics/lowess.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Statistics
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SubsMat
copying Bio/SubsMat/FreqTable.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SubsMat
copying Bio/SubsMat/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SubsMat
copying Bio/SubsMat/MatrixInfo.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SubsMat
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SVDSuperimposer
copying Bio/SVDSuperimposer/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SVDSuperimposer
copying Bio/SVDSuperimposer/SVDSuperimposer.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SVDSuperimposer
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SwissProt
copying Bio/SwissProt/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SwissProt
copying Bio/SwissProt/KeyWList.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SwissProt
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/TogoWS
copying Bio/TogoWS/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/TogoWS
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/BaseTree.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/_sugar.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/_utils.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/NexusIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/_io.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/PhyloXML.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/PhyloXMLIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/NewickIO.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
copying Bio/Phylo/Newick.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Applications
copying Bio/Phylo/Applications/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Raxml.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Phyml.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Applications
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_paml.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/codeml.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/chi2.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/yn00.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
copying Bio/Phylo/PAML/baseml.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/UniGene
copying Bio/UniGene/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/UniGene
copying Bio/UniGene/UniGene.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/UniGene
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Wise
copying Bio/Wise/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Wise
copying Bio/Wise/dnal.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Wise
copying Bio/Wise/psw.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Wise
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL
copying BioSQL/BioSeq.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL
copying BioSQL/BioSeqDatabase.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL
copying BioSQL/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL
copying BioSQL/Loader.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL
copying BioSQL/DBUtils.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Affy
copying Bio/Affy/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Affy
copying Bio/Affy/CelFile.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Affy
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster
copying Bio/Cluster/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree
copying Bio/KDTree/__init__.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree
copying Bio/KDTree/KDTree.py -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/eLink_020511.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/phrase.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/notat.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/list.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isodia.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/math.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/link.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isotech.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/display.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/para.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/chars.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isobox.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/format.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/references.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/section.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isonum.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/modules.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isopub.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/common.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs
creating build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/simple.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/bottle.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/ssm_2d.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/ssm_1d.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/island.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/decline_split.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/decline_lambda.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/split_ssm_1d.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/split_ssm_2d.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
copying Bio/PopGen/SimCoal/data/split_island.par -> build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data
running build_ext
building 'Bio.cpairwise2' extension
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -IBio -I/usr/local/include/python2.7 -c Bio/cpairwise2module.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/cpairwise2module.o
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/cpairwise2module.o -o build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/cpairwise2.so
building 'Bio.trie' extension
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -IBio -I/usr/local/include/python2.7 -c Bio/triemodule.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/triemodule.o
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -IBio -I/usr/local/include/python2.7 -c Bio/trie.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/trie.o
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/triemodule.o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/trie.o -o build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/trie.so
building 'Bio.PDB.mmCIF.MMCIFlex' extension
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -IBio -I/usr/local/include/python2.7 -c Bio/PDB/mmCIF/lex.yy.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF/lex.yy.o
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -IBio -I/usr/local/include/python2.7 -c Bio/PDB/mmCIF/MMCIFlexmodule.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF/MMCIFlexmodule.o
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF/lex.yy.o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF/MMCIFlexmodule.o -o build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF/MMCIFlex.so
building 'Bio.Nexus.cnexus' extension
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c Bio/Nexus/cnexus.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/cnexus.o
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/cnexus.o -o build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/cnexus.so
building 'Bio.Cluster.cluster' extension
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/Cluster/clustermodule.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster/clustermodule.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from Bio/Cluster/clustermodule.c:2:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/Cluster/cluster.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster/cluster.o
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster/clustermodule.o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster/cluster.o -o build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster/cluster.so
building 'Bio.KDTree._CKDTree' extension
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/KDTree/KDTree.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/KDTree.o
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/KDTree/KDTreemodule.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/KDTreemodule.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from Bio/KDTree/KDTreemodule.c:2:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/KDTree.o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/KDTreemodule.o -o build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/_CKDTree.so
building 'Bio.Motif._pwm' extension
creating build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif
cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/Motif/_pwm.c -o build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/_pwm.o
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1760,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from Bio/Motif/_pwm.c:2:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
cc -shared -O2 -pipe -fno-strict-aliasing build/temp.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/_pwm.o -o build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/_pwm.so
===>  Staging for py27-biopython-1.60_3
===>   py27-biopython-1.60_3 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found
===>   py27-biopython-1.60_3 depends on package: py27-reportlab1>0 - found
===>   py27-biopython-1.60_3 depends on package: py27-setuptools27>0 - found
===>   py27-biopython-1.60_3 depends on file: /usr/local/bin/python2.7 - found
===>   py27-biopython-1.60_3 depends on executable: python2 - found
===>   Generating temporary packing list
running install
running build
running build_py
running build_ext
running install_lib
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqFeature.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/MarkovModel.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SwissProt/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SwissProt/KeyWList.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/Ace.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/Phd.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/Applications/_Novoalign.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Sequencing/Applications/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Medline
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Medline/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Medline
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/BaseTree.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/_sugar.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/_utils.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/NexusIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/_io.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PhyloXML.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PhyloXMLIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/NewickIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Newick.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/_parse_codeml.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/_parse_yn00.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/_paml.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/codeml.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/chi2.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/yn00.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/_parse_baseml.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/PAML/baseml.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Applications/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Applications/_Raxml.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Phylo/Applications/_Phyml.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/HSExposure.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Structure.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmCIF
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmCIF
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/mmCIF/MMCIFlex.so -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmCIF
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/FragmentMapper.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/MMCIF2Dict.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Residue.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/StructureBuilder.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/ResidueDepth.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/DSSP.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Polypeptide.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Selection.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Dice.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/MMCIFParser.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/PDBExceptions.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/StructureAlignment.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/PSEA.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Chain.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/parse_pdb_header.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Entity.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/PDBParser.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Vector.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/AbstractPropertyMap.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Atom.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/NACCESS.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Superimposer.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/Model.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/NeighborSearch.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/PDBIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PDB/PDBList.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Data/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Data/CodonTable.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Data/IUPACData.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Data
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover/GeneralPoint.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover/Uniform.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover/General.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover/TwoPoint.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Crossover/Point.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Mutation/General.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Mutation/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Mutation/Simple.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Organism.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Repair/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Repair/Stabilizing.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Evolver.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection/Abstract.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection/RouletteWheel.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection/Diversity.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GA/Selection/Tournament.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/pairwise2.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/phrase.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/eLink_101123.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isomopf.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/SP_General.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/eSpell.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/htmltable.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/notat.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isoamsb.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/list.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/archivecustom-models.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isodia.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/math.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/HomoloGene.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/archivecustom-classes.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isoamsc.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/link.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/eSummary_041029.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isoamsr.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/mmlextra.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/eLink_020511.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isogrk3.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/elink_020122.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isotech.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isogrk1.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/display.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/para.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isocyr2.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/chars.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pubmed_090101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pubmed_020114.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/eSearch_020511.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/eInfo_020511.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/eLink_090910.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isomfrk.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/mmlalias.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/egquery.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/backmatter.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/archivecustom-modules.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isocyr1.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/archivearticle.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/default-mixes.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/taxon.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/ePost_020511.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isobox.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/mathml2.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isolat1.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pubmed_100101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/format.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/journalmeta.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/references.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/section.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pubmed_080101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/mathmlsetup.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pubmed_110101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isonum.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isoamsn.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/default-classes.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/modules.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/mathml2-qname-1.mod -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pubmed_100301.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pubmed_120101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isogrk2.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isolat2.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isopub.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/common.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/articlemeta.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isogrk4.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isoamsa.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isoamso.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/isomscr.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/pmc-1.dtd -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/DTDs/xmlspecchars.ent -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Entrez/Parser.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/DocSQL.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/File.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Enzyme
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Enzyme/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Enzyme
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Map
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Map/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Map
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Compound
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KEGG/Compound/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Compound
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM/MarkovModel.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM/DynamicProgramming.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM/Utilities.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HMM/Trainer.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/HotRand.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/CAPS
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/CAPS/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/CAPS
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Index.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/TogoWS
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/TogoWS/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/TogoWS
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Alphabet/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Alphabet/Reduced.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Alphabet/IUPAC.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/FSSP/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/FSSP/fssp_rec.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/FSSP/FSSPTools.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqRecord.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Wise
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Wise/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Wise
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Wise/dnal.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Wise
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Wise/psw.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Wise
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy/Enzyme.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy/Prodoc.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy/ScanProsite.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ExPASy/Prosite.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NaiveBayes.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss/PrimerSearch.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss/Primer3.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Emboss/Applications.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/PhdIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/InsdcIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/PirIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/SeqXmlIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/UniprotIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/AceIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/AbiIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/IgIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/_index.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/TabIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/Interfaces.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/FastaIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/_convert.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/SffIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/SwissIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqIO/QualityIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/Restriction.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction/_Update
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/_Update/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction/_Update
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/_Update/RestrictionCompiler.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction/_Update
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/_Update/Update.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction/_Update
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/Restriction_Dictionary.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/PrintFormat.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Restriction/RanaConfig.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Statistics/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Statistics/lowess.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/trie.so -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Application
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Application/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Application
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Cluster
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster/cluster.so -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Cluster
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Cluster/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Cluster
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/AlignInfo.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Generic.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_TCoffee.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_Muscle.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_Prank.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_Mafft.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_Clustalw.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_ClustalOmega.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_Probcons.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Align/Applications/_Dialign.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/CodonUsageIndices.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/IsoelectricPoint.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/CodonUsage.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/ProtParamData.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/MeltingTemp.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/ProtParam.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/CheckSum.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SeqUtils/lcc.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/_pwm.so -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/_Motif.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Thresholds.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Parsers
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Parsers
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers/MAST.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Parsers
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers/MEME.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Parsers
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Parsers/AlignAce.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Parsers
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Applications/_AlignAce.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Applications
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Motif/Applications/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Motif/Applications
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_Track.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_Diagram.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_Graph.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_Feature.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_Colors.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/Comparative.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/BasicChromosome.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/Distribution.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Graphics/DisplayRepresentation.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/MaxEntropy.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Compass
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Compass/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Compass
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/ParserSupport.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene/Motif.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene/Signature.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene/Pattern.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Gene/Schema.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/BackPropagation/Network.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/BackPropagation/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/BackPropagation/Layer.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/Training.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NeuralNetwork/StopTraining.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NMR
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NMR/NOEtools.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NMR
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NMR/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NMR
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/NMR/xpktools.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NMR
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast/NCBIWWW.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast/NCBIXML.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast/Record.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast/Applications.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast/ParseBlastTable.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Blast/NCBIStandalone.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Blast
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Affy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Affy/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Affy
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Affy/CelFile.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Affy
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Crystal
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Crystal/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Crystal
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/UniGene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/UniGene/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/UniGene
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/UniGene/UniGene.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/UniGene
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/Hie.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/Cla.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/three_to_one_dict.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/Raf.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/Dom.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/Residues.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SCOP/Des.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Search.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/Trees.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/Nodes.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/Nexus.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Nexus/cnexus.so -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/LogisticRegression.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/kNN.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/cpairwise2.so -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Seq.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/bgzf.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/_py3k.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/_CKDTree.so -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/KDTree/KDTree.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/PhylipIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/NexusIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/StockholmIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/Interfaces.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/FastaIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/ClustalIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/AlignIO/EmbossIO.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SVDSuperimposer
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SVDSuperimposer/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SVDSuperimposer
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SVDSuperimposer/SVDSuperimposer.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SVDSuperimposer
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank/Record.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank/utils.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/GenBank/Scanner.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Geo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Geo/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Geo
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Geo/Record.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Geo
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist/Async.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist/Controller.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/FDist/Utils.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/Async/Local.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/Async/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop/FileParser.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop/EasyController.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop/Controller.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop/LargeFileParser.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/GenePop/Utils.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/Async.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/Template.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/Cache.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/Controller.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/simple.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/bottle.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/ssm_2d.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/ssm_1d.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/island.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/decline_split.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/decline_lambda.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/split_ssm_2d.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/PopGen/SimCoal/data/split_island.par -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SubsMat/FreqTable.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SubsMat/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/SubsMat/MatrixInfo.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/triefind.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep/Graph.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep/MultiGraph.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/Bio/Pathway/Rep/HashSet.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep
creating /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/BioSQL
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL/BioSeq.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/BioSQL
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL/BioSeqDatabase.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/BioSQL
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL/__init__.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/BioSQL
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL/Loader.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/BioSQL
copying build/lib.freebsd-11.0-CURRENT-powerpc-2.7/BioSQL/DBUtils.py -> /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/BioSQL
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqFeature.py to SeqFeature.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/MarkovModel.py to MarkovModel.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt/KeyWList.py to KeyWList.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Ace.py to Ace.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Phd.py to Phd.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Medline/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/BaseTree.py to BaseTree.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/_sugar.py to _sugar.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/_utils.py to _utils.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/NexusIO.py to NexusIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/_io.py to _io.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PhyloXML.py to PhyloXML.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/NewickIO.py to NewickIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Newick.py to Newick.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_paml.py to _paml.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/codeml.py to codeml.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/chi2.py to chi2.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/yn00.py to yn00.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/baseml.py to baseml.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/HSExposure.py to HSExposure.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Structure.py to Structure.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmCIF/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Residue.py to Residue.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/DSSP.py to DSSP.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Polypeptide.py to Polypeptide.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Selection.py to Selection.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Dice.py to Dice.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PSEA.py to PSEA.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Chain.py to Chain.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Entity.py to Entity.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBParser.py to PDBParser.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Vector.py to Vector.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Atom.py to Atom.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/NACCESS.py to NACCESS.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Superimposer.py to Superimposer.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Model.py to Model.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBIO.py to PDBIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBList.py to PDBList.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Data/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Data/CodonTable.py to CodonTable.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Data/IUPACData.py to IUPACData.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/GeneralPoint.py to GeneralPoint.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/Uniform.py to Uniform.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/General.py to General.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/TwoPoint.py to TwoPoint.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/Point.py to Point.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation/General.py to General.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation/Simple.py to Simple.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Organism.py to Organism.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair/Stabilizing.py to Stabilizing.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Evolver.py to Evolver.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/Abstract.py to Abstract.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/RouletteWheel.py to RouletteWheel.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/Diversity.py to Diversity.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/Tournament.py to Tournament.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/pairwise2.py to pairwise2.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/Parser.py to Parser.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/DocSQL.py to DocSQL.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/File.py to File.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Enzyme/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Map/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Compound/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/MarkovModel.py to MarkovModel.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/Utilities.py to Utilities.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/Trainer.py to Trainer.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/HotRand.py to HotRand.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/CAPS/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Index.py to Index.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/TogoWS/__init__.py to __init__.pyc
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byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet/Reduced.py to Reduced.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet/IUPAC.py to IUPAC.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP/__init__.py to __init__.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP/fssp_rec.py to fssp_rec.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP/FSSPTools.py to FSSPTools.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqRecord.py to SeqRecord.pyc
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byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy/Prodoc.py to Prodoc.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy/Prosite.py to Prosite.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/NaiveBayes.py to NaiveBayes.pyc
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byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss/Applications.py to Applications.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/PhdIO.py to PhdIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/PirIO.py to PirIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/AceIO.py to AceIO.pyc
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byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/AbiIO.py to AbiIO.pyc
byte-compiling /obj/buildshare/ports/355755/biology/py-biopython/work/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO/IgIO.py to IgIO.pyc
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writing byte-compilation script '/tmp/tmpCSdKTQ.py'
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====> Compressing man pages (compress-man)
===>  Installing for py27-biopython-1.60_3
===>  Checking if biology/py-biopython already installed
===>   Registering installation for py27-biopython-1.60_3
Installing py27-biopython-1.60_3... done
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===>  Building package for py27-biopython-1.60_3
slot2: removed