Building py27-DendroPy-3.12.0.txz (origin /buildshare/ports/355755/science/py-DendroPy) for powerpc-10-0 on XXX slot2: created x distfiles/ x distfiles/DendroPy-3.12.0.tar.gz x packages/ x packages/gettext-0.18.3.1_1.txz x packages/pkg-1.2.7_2.txz x packages/py27-setuptools27-2.0.1.txz x packages/python27-2.7.6_4.txz ELF ldconfig path: /lib /usr/lib /usr/lib/compat Make depends ===> py27-DendroPy-3.12.0 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /buildshare/ports/355755/ports-mgmt/pkg ===> Installing existing package /packages/pkg-1.2.7_2.txz Installing pkg-1.2.7_2... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of py27-DendroPy-3.12.0 ===> py27-DendroPy-3.12.0 depends on package: py27-setuptools27>0 - not found ===> Verifying install for py27-setuptools27>0 in /buildshare/ports/355755/devel/py-setuptools27 ===> Installing existing package /packages/py27-setuptools27-2.0.1.txz Installing py27-setuptools27-2.0.1...Installing python27-2.7.6_4...Installing gettext-0.18.3.1_1... done done done ==== Note that some of the standard modules are provided as separate ports since they require extra dependencies: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Install them as needed. ==== ===> Returning to build of py27-DendroPy-3.12.0 ===> py27-DendroPy-3.12.0 depends on file: /usr/local/bin/python2.7 - found ===> py27-DendroPy-3.12.0 depends on package: py27-setuptools27>0 - found ===> py27-DendroPy-3.12.0 depends on file: /usr/local/bin/python2.7 - found Make install ===> License BSD accepted by the user ===> py27-DendroPy-3.12.0 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-DendroPy-3.12.0 for building ===> Extracting for py27-DendroPy-3.12.0 => SHA256 Checksum OK for DendroPy-3.12.0.tar.gz. ===> Patching for py27-DendroPy-3.12.0 ===> Applying FreeBSD patches for py27-DendroPy-3.12.0 ===> py27-DendroPy-3.12.0 depends on package: py27-setuptools27>0 - found ===> py27-DendroPy-3.12.0 depends on file: /usr/local/bin/python2.7 - found ===> Configuring for py27-DendroPy-3.12.0 using setuptools ('/usr/local/lib/python2.7/site-packages/setuptools/__init__.pyc') searching for packages packages identified: dendropy : dendropy dendropy.mathlib : dendropy/mathlib dendropy.utility : dendropy/utility dendropy.interop : dendropy/interop dendropy.dataio : dendropy/dataio dendropy.test : dendropy/test dendropy.dataobject : dendropy/dataobject dendropy.test.support : dendropy/test/support scripts identified: scripts/sumtrees/sumtrees.py, scripts/sumtrees/cattrees.py, scripts/sumtrees/sumlabels.py, scripts/calculators/strict_consensus_merge.py, scripts/calculators/long_branch_symmdiff.py setuptools command extensions are available coverage could not be imported: test coverage analysis not available coverage analysis not available running config ===> Building for py27-DendroPy-3.12.0 using setuptools ('/usr/local/lib/python2.7/site-packages/setuptools/__init__.pyc') searching for packages packages identified: dendropy : dendropy dendropy.mathlib : dendropy/mathlib dendropy.utility : dendropy/utility dendropy.interop : dendropy/interop dendropy.dataio : dendropy/dataio dendropy.test : dendropy/test dendropy.dataobject : dendropy/dataobject dendropy.test.support : dendropy/test/support scripts identified: scripts/sumtrees/sumtrees.py, scripts/sumtrees/cattrees.py, scripts/sumtrees/sumlabels.py, scripts/calculators/strict_consensus_merge.py, scripts/calculators/long_branch_symmdiff.py setuptools command extensions are available coverage could not be imported: test coverage analysis not available coverage analysis not available running bdist_egg running egg_info writing requirements to DendroPy.egg-info/requires.txt writing DendroPy.egg-info/PKG-INFO writing top-level names to DendroPy.egg-info/top_level.txt writing dependency_links to DendroPy.egg-info/dependency_links.txt writing entry points to DendroPy.egg-info/entry_points.txt warning: manifest_maker: standard file '-c' not found reading manifest file 'DendroPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'ANNOUNCE.txt' warning: no files found matching 'COPYING.txt' warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution writing manifest file 'DendroPy.egg-info/SOURCES.txt' installing library code to build/bdist.freebsd-11.0-CURRENT-powerpc/egg running install_lib running build_py creating build creating build/lib creating build/lib/dendropy copying dendropy/seqsim.py -> build/lib/dendropy copying dendropy/reconcile.py -> build/lib/dendropy copying dendropy/treesplit.py -> build/lib/dendropy copying dendropy/__init__.py -> build/lib/dendropy copying dendropy/treecalc.py -> build/lib/dendropy copying dendropy/popgensim.py -> build/lib/dendropy copying dendropy/treemanip.py -> build/lib/dendropy copying dendropy/treesum.py -> build/lib/dendropy copying dendropy/popgenstat.py -> build/lib/dendropy copying dendropy/seqmodel.py -> build/lib/dendropy copying dendropy/coalescent.py -> build/lib/dendropy copying dendropy/scm.py -> build/lib/dendropy copying dendropy/treesim.py -> build/lib/dendropy copying dendropy/continuous.py -> build/lib/dendropy creating build/lib/dendropy/mathlib copying dendropy/mathlib/__init__.py -> build/lib/dendropy/mathlib copying dendropy/mathlib/statistics.py -> build/lib/dendropy/mathlib copying dendropy/mathlib/distance.py -> build/lib/dendropy/mathlib copying dendropy/mathlib/linearalg.py -> build/lib/dendropy/mathlib copying dendropy/mathlib/probability.py -> build/lib/dendropy/mathlib creating build/lib/dendropy/utility copying dendropy/utility/textutils.py -> build/lib/dendropy/utility copying dendropy/utility/__init__.py -> build/lib/dendropy/utility copying dendropy/utility/ElementTree.py -> build/lib/dendropy/utility copying dendropy/utility/vcsinfo.py -> build/lib/dendropy/utility copying dendropy/utility/iosys.py -> build/lib/dendropy/utility copying dendropy/utility/debugging.py -> build/lib/dendropy/utility copying dendropy/utility/containers.py -> build/lib/dendropy/utility copying dendropy/utility/fileutils.py -> build/lib/dendropy/utility copying dendropy/utility/cli.py -> build/lib/dendropy/utility copying dendropy/utility/messaging.py -> build/lib/dendropy/utility copying dendropy/utility/bibtex.py -> build/lib/dendropy/utility copying dendropy/utility/error.py -> build/lib/dendropy/utility copying dendropy/utility/termutils.py -> build/lib/dendropy/utility copying dendropy/utility/session.py -> build/lib/dendropy/utility creating build/lib/dendropy/interop copying dendropy/interop/__init__.py -> build/lib/dendropy/interop copying dendropy/interop/ncbi.py -> build/lib/dendropy/interop copying dendropy/interop/seqgen.py -> build/lib/dendropy/interop copying dendropy/interop/muscle.py -> build/lib/dendropy/interop copying dendropy/interop/biopython.py -> build/lib/dendropy/interop copying dendropy/interop/entrez.py -> build/lib/dendropy/interop copying dendropy/interop/gbif.py -> build/lib/dendropy/interop copying dendropy/interop/ape.py -> build/lib/dendropy/interop copying dendropy/interop/raxml.py -> build/lib/dendropy/interop copying dendropy/interop/paup.py -> build/lib/dendropy/interop copying dendropy/interop/ete.py -> build/lib/dendropy/interop copying dendropy/interop/genbank.py -> build/lib/dendropy/interop creating build/lib/dendropy/dataio copying dendropy/dataio/nexustokenizer.py -> build/lib/dendropy/dataio copying dendropy/dataio/beast.py -> build/lib/dendropy/dataio copying dendropy/dataio/nexustreeiter.py -> build/lib/dendropy/dataio copying dendropy/dataio/nexml.py -> build/lib/dendropy/dataio copying dendropy/dataio/__init__.py -> build/lib/dendropy/dataio copying dendropy/dataio/phylip.py -> build/lib/dendropy/dataio copying dendropy/dataio/nexuswriter.py -> build/lib/dendropy/dataio copying dendropy/dataio/nexusreader_ncl.py -> build/lib/dendropy/dataio copying dendropy/dataio/nexusreader_py.py -> build/lib/dendropy/dataio copying dendropy/dataio/dataschema.py -> build/lib/dendropy/dataio copying dendropy/dataio/ioclient.py -> build/lib/dendropy/dataio copying dendropy/dataio/fasta.py -> build/lib/dendropy/dataio copying dendropy/dataio/xmlparser.py -> build/lib/dendropy/dataio copying dendropy/dataio/newick.py -> build/lib/dendropy/dataio creating build/lib/dendropy/test copying dendropy/test/test_dataio_fasta.py -> build/lib/dendropy/test copying dendropy/test/test_nexmlvalidator.py -> build/lib/dendropy/test copying dendropy/test/test_tree_taxa.py -> build/lib/dendropy/test copying dendropy/test/test_tree_metrics.py -> build/lib/dendropy/test copying dendropy/test/test_fitch.py -> build/lib/dendropy/test copying dendropy/test/test_scm.py -> build/lib/dendropy/test copying dendropy/test/test_asciitree.py -> build/lib/dendropy/test copying dendropy/test/test_annotations.py -> build/lib/dendropy/test copying dendropy/test/test_split_counting.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_newick.py -> build/lib/dendropy/test copying dendropy/test/__init__.py -> build/lib/dendropy/test copying dendropy/test/test_sumtrees.py -> build/lib/dendropy/test copying dendropy/test/test_distance.py -> build/lib/dendropy/test copying dendropy/test/test_tree_traversal.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_tree_rooting.py -> build/lib/dendropy/test copying dendropy/test/test_popgensim.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_beast.py -> build/lib/dendropy/test copying dendropy/test/test_dataobject_char_array.py -> build/lib/dendropy/test copying dendropy/test/test_continuous.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_nexus.py -> build/lib/dendropy/test copying dendropy/test/test_statistics.py -> build/lib/dendropy/test copying dendropy/test/test_dataobject_tree_list.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_nexustokenizer.py -> build/lib/dendropy/test copying dendropy/test/test_tree_manips.py -> build/lib/dendropy/test copying dendropy/test/test_tree_calcs.py -> build/lib/dendropy/test copying dendropy/test/test_dataobject_tree.py -> build/lib/dendropy/test copying dendropy/test/test_coalescent.py -> build/lib/dendropy/test copying dendropy/test/test_popgenstat.py -> build/lib/dendropy/test copying dendropy/test/test_dataobject_cloning.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_phylip.py -> build/lib/dendropy/test copying dendropy/test/test_containers.py -> build/lib/dendropy/test copying dendropy/test/test_tree_from_splits.py -> build/lib/dendropy/test copying dendropy/test/test_tree_sims.py -> build/lib/dendropy/test copying dendropy/test/test_dataobject_dataset.py -> build/lib/dendropy/test copying dendropy/test/test_datagen.py -> build/lib/dendropy/test copying dendropy/test/test_tree_sums.py -> build/lib/dendropy/test copying dendropy/test/test_linearalg.py -> build/lib/dendropy/test copying dendropy/test/test_split_masking.py -> build/lib/dendropy/test copying dendropy/test/test_biopython.py -> build/lib/dendropy/test copying dendropy/test/test_paup.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_nexml.py -> build/lib/dendropy/test copying dendropy/test/test_tree_structuring.py -> build/lib/dendropy/test copying dendropy/test/test_dataobject_taxon.py -> build/lib/dendropy/test copying dendropy/test/test_seqsim.py -> build/lib/dendropy/test copying dendropy/test/test_ape.py -> build/lib/dendropy/test copying dendropy/test/test_reconcile.py -> build/lib/dendropy/test copying dendropy/test/test_dataio_indexing.py -> build/lib/dendropy/test copying dendropy/test/test_splits_on_incomplete_leaf_sets.py -> build/lib/dendropy/test copying dendropy/test/test_ete.py -> build/lib/dendropy/test creating build/lib/dendropy/dataobject copying dendropy/dataobject/tree.py -> build/lib/dendropy/dataobject copying dendropy/dataobject/__init__.py -> build/lib/dendropy/dataobject copying dendropy/dataobject/dataset.py -> build/lib/dendropy/dataobject copying dendropy/dataobject/base.py -> build/lib/dendropy/dataobject copying dendropy/dataobject/char.py -> build/lib/dendropy/dataobject copying dendropy/dataobject/taxon.py -> build/lib/dendropy/dataobject creating build/lib/dendropy/test/support copying dendropy/test/support/pathmap.py -> build/lib/dendropy/test/support copying dendropy/test/support/runlevel.py -> build/lib/dendropy/test/support copying dendropy/test/support/__init__.py -> build/lib/dendropy/test/support copying dendropy/test/support/nexmlvalidator.py -> build/lib/dendropy/test/support copying dendropy/test/support/extendedtest.py -> build/lib/dendropy/test/support copying dendropy/test/support/datagen.py -> build/lib/dendropy/test/support copying dendropy/test/support/generate_reference_tree.py -> build/lib/dendropy/test/support copying dendropy/test/support/tree_parse_speed.py -> build/lib/dendropy/test/support copying dendropy/test/support/coverage_analysis.py -> build/lib/dendropy/test/support copying dendropy/test/support/generate_pruned_trees.py -> build/lib/dendropy/test/support copying dendropy/test/support/datatest.py -> build/lib/dendropy/test/support creating build/lib/dendropy/test/data creating build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/COII_Apes.nex -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/angiosperms.chars.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/angiosperms.chars.txt -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/apternodus.chars.hacked-for-tests.txt -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/apternodus.chars.interleaved.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/apternodus.chars.nexml -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/apternodus.chars.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/avian-ovomucoids.chars.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/avian-ovomucoids.chars.txt -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/bad_names.fasta -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/caenophidia_mos.chars.fasta -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/caenophidia_mos.chars.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/caenophidia_mos.chars.txt -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/codons.nexml -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/crotaphytus_bicinctores.cytb.aligned.nexml -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/crotaphytus_bicinctores.nd2.aligned.nexml -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/interleaved-charsets-all.nex -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/interleaved-charsets-c1.nex -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/interleaved-charsets-c2.nex -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/interleaved-charsets-c3.nex -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/orti.nex -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.csv -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.interleaved.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.simple.interleaved.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.simple.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.subsets-1stpos.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.subsets-2ndpos.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.subsets-3rdpos.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.subsets-all.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.subsets-coding.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/primates.chars.subsets-noncoding.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae.chars.beast.calibrated.xml -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae.chars.beast.uncalibrated.xml -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae.chars.fasta -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae.chars.interleaved.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae.chars.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae.chars.phylip -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae.chars.txt -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae_continuous.chars.nexml -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae_continuous.chars.nexus -> build/lib/dendropy/test/data/chars copying dendropy/test/data/chars/pythonidae_continuous.chars.txt -> build/lib/dendropy/test/data/chars creating build/lib/dendropy/test/data/mixed copying dendropy/test/data/mixed/geospiza.nex -> build/lib/dendropy/test/data/mixed copying dendropy/test/data/mixed/multitaxa_mesquite.nex -> build/lib/dendropy/test/data/mixed copying dendropy/test/data/mixed/reference_single_taxonset_dataset.nex -> build/lib/dendropy/test/data/mixed creating build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/apternodus.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/bird_orders.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/deepcoal1.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/feb032009.splits.csv -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/feb032009.trees.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_rooted.dendropy-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_rooted.paup-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_rooted.pre-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_rooted.pruned_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_rooted.retained_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_unrooted.dendropy-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_unrooted.paup-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_unrooted.pre-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_unrooted.pruned_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/incomplete_leaves_unrooted.retained_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/maj-rule-bug1.trees.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/maj-rule-bug2.trees.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/primates.beast.mcct.meanh.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/primates.beast.mcct.medianh.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/primates.beast.mcct.noedgelens.tree -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/primates.beast.mcmc.trees -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/primates.trees.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_rooted.dendropy-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_rooted.paup-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_rooted.pre-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_rooted.pruned_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_rooted.retained_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_unrooted.dendropy-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_unrooted.paup-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_unrooted.pre-pruned.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_unrooted.pruned_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/prune_unrooted.retained_taxa.txt -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.annotated.bad.nexml -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.annotated.nexml -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.beast.mcmc.trees -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.beast.summary.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mb.con -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mb.run1.t -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mb.run2.t -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mb.run3.t -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mb.run4.t -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mlboots.newick.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mlboots.nexus.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mle.newick -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.mle.nex -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.random.bd0301.midpoint-rooted.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.random.bd0301.randomly-rooted.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.random.bd0301.tre -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.reference-trees.newick -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.reference-trees.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.reference-trees.no-taxa-block.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/pythonidae.reference-trees.no-taxa-no-translate-block.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/rana.trees.nexus -> build/lib/dendropy/test/data/trees copying dendropy/test/data/trees/treebase_s373.xml -> build/lib/dendropy/test/data/trees creating build/bdist.freebsd-11.0-CURRENT-powerpc creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/seqsim.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/reconcile.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/treesplit.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/treecalc.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib copying build/lib/dendropy/mathlib/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib copying build/lib/dendropy/mathlib/statistics.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib copying build/lib/dendropy/mathlib/distance.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib copying build/lib/dendropy/mathlib/linearalg.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib copying build/lib/dendropy/mathlib/probability.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib copying build/lib/dendropy/popgensim.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/treemanip.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/treesum.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/popgenstat.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/textutils.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/ElementTree.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/vcsinfo.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/iosys.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/debugging.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/containers.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/fileutils.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/cli.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/messaging.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/bibtex.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/error.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/termutils.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility copying build/lib/dendropy/utility/session.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/ncbi.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/seqgen.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/muscle.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/biopython.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/entrez.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/gbif.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/ape.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/raxml.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/paup.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/ete.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/interop/genbank.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop copying build/lib/dendropy/seqmodel.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/coalescent.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/nexustokenizer.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/beast.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/nexustreeiter.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/nexml.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/phylip.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/nexuswriter.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/nexusreader_ncl.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/nexusreader_py.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/dataschema.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/ioclient.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/fasta.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/xmlparser.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio copying build/lib/dendropy/dataio/newick.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_fasta.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_nexmlvalidator.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_taxa.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_metrics.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_fitch.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_scm.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_asciitree.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_annotations.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_split_counting.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_newick.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_sumtrees.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_distance.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_traversal.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_tree_rooting.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_popgensim.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_beast.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataobject_char_array.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_continuous.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_nexus.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_statistics.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataobject_tree_list.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_nexustokenizer.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_manips.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_calcs.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/pathmap.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/runlevel.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/nexmlvalidator.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/extendedtest.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/datagen.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/generate_reference_tree.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/tree_parse_speed.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/coverage_analysis.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/generate_pruned_trees.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/support/datatest.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support copying build/lib/dendropy/test/test_dataobject_tree.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_coalescent.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_popgenstat.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataobject_cloning.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_phylip.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_containers.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_from_splits.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_sims.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataobject_dataset.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_datagen.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/mixed copying build/lib/dendropy/test/data/mixed/reference_single_taxonset_dataset.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/mixed copying build/lib/dendropy/test/data/mixed/geospiza.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/mixed copying build/lib/dendropy/test/data/mixed/multitaxa_mesquite.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/mixed creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.simple.interleaved.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae.chars.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.subsets-2ndpos.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.simple.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/caenophidia_mos.chars.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.subsets-1stpos.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/interleaved-charsets-c3.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/angiosperms.chars.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/apternodus.chars.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/avian-ovomucoids.chars.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.subsets-coding.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/interleaved-charsets-c2.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/interleaved-charsets-c1.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/crotaphytus_bicinctores.cytb.aligned.nexml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae_continuous.chars.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/bad_names.fasta -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/caenophidia_mos.chars.fasta -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/COII_Apes.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae.chars.phylip -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae_continuous.chars.nexml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.csv -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/interleaved-charsets-all.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae.chars.interleaved.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/angiosperms.chars.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae.chars.beast.calibrated.xml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae.chars.beast.uncalibrated.xml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/orti.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.interleaved.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/avian-ovomucoids.chars.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae_continuous.chars.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae.chars.fasta -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/codons.nexml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/caenophidia_mos.chars.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/apternodus.chars.hacked-for-tests.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/apternodus.chars.nexml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/apternodus.chars.interleaved.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/pythonidae.chars.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.subsets-all.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.subsets-noncoding.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/primates.chars.subsets-3rdpos.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars copying build/lib/dendropy/test/data/chars/crotaphytus_bicinctores.nd2.aligned.nexml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/chars creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/deepcoal1.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_unrooted.dendropy-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_unrooted.paup-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.random.bd0301.midpoint-rooted.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/apternodus.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_unrooted.paup-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/primates.trees.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_rooted.dendropy-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_rooted.pruned_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.reference-trees.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/primates.beast.mcct.noedgelens.tree -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mb.con -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.annotated.nexml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_rooted.retained_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_rooted.retained_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.beast.mcmc.trees -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/rana.trees.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_unrooted.retained_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.reference-trees.no-taxa-no-translate-block.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/feb032009.splits.csv -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.random.bd0301.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_rooted.pre-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_unrooted.retained_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mb.run4.t -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mle.newick -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mlboots.nexus.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mb.run3.t -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.random.bd0301.randomly-rooted.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_rooted.dendropy-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/feb032009.trees.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/maj-rule-bug2.trees.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/primates.beast.mcmc.trees -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_rooted.pruned_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_unrooted.dendropy-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_unrooted.pre-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.beast.summary.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_rooted.paup-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/primates.beast.mcct.medianh.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_unrooted.pruned_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.reference-trees.no-taxa-block.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/bird_orders.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mlboots.newick.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mle.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.annotated.bad.nexml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.reference-trees.newick -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_rooted.pre-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_rooted.paup-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/treebase_s373.xml -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/incomplete_leaves_unrooted.pruned_taxa.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/prune_unrooted.pre-pruned.nex -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/primates.beast.mcct.meanh.tre -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mb.run2.t -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/maj-rule-bug1.trees.nexus -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/data/trees/pythonidae.mb.run1.t -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/data/trees copying build/lib/dendropy/test/test_tree_sums.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_linearalg.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_split_masking.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_biopython.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_paup.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_nexml.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_tree_structuring.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataobject_taxon.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_seqsim.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_ape.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_reconcile.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_dataio_indexing.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_splits_on_incomplete_leaf_sets.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test copying build/lib/dendropy/test/test_ete.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject copying build/lib/dendropy/dataobject/tree.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject copying build/lib/dendropy/dataobject/__init__.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject copying build/lib/dendropy/dataobject/dataset.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject copying build/lib/dendropy/dataobject/base.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject copying build/lib/dendropy/dataobject/char.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject copying build/lib/dendropy/dataobject/taxon.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject copying build/lib/dendropy/scm.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/treesim.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy copying build/lib/dendropy/continuous.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/seqsim.py to seqsim.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/reconcile.py to reconcile.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/treesplit.py to treesplit.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/treecalc.py to treecalc.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib/statistics.py to statistics.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib/distance.py to distance.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib/linearalg.py to linearalg.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/mathlib/probability.py to probability.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/popgensim.py to popgensim.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/treemanip.py to treemanip.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/treesum.py to treesum.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/popgenstat.py to popgenstat.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/textutils.py to textutils.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/ElementTree.py to ElementTree.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/vcsinfo.py to vcsinfo.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/iosys.py to iosys.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/debugging.py to debugging.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/containers.py to containers.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/fileutils.py to fileutils.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/cli.py to cli.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/messaging.py to messaging.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/bibtex.py to bibtex.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/error.py to error.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/termutils.py to termutils.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/utility/session.py to session.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/ncbi.py to ncbi.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/seqgen.py to seqgen.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/muscle.py to muscle.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/biopython.py to biopython.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/entrez.py to entrez.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/gbif.py to gbif.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/ape.py to ape.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/raxml.py to raxml.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/paup.py to paup.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/ete.py to ete.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/interop/genbank.py to genbank.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/seqmodel.py to seqmodel.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/coalescent.py to coalescent.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/nexustokenizer.py to nexustokenizer.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/beast.py to beast.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/nexustreeiter.py to nexustreeiter.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/nexml.py to nexml.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/phylip.py to phylip.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/nexuswriter.py to nexuswriter.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/nexusreader_ncl.py to nexusreader_ncl.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/nexusreader_py.py to nexusreader_py.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/dataschema.py to dataschema.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/ioclient.py to ioclient.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/fasta.py to fasta.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/xmlparser.py to xmlparser.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataio/newick.py to newick.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_fasta.py to test_dataio_fasta.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_nexmlvalidator.py to test_nexmlvalidator.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_taxa.py to test_tree_taxa.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_metrics.py to test_tree_metrics.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_fitch.py to test_fitch.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_scm.py to test_scm.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_asciitree.py to test_asciitree.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_annotations.py to test_annotations.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_split_counting.py to test_split_counting.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_newick.py to test_dataio_newick.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_sumtrees.py to test_sumtrees.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_distance.py to test_distance.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_traversal.py to test_tree_traversal.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_tree_rooting.py to test_dataio_tree_rooting.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_popgensim.py to test_popgensim.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_beast.py to test_dataio_beast.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataobject_char_array.py to test_dataobject_char_array.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_continuous.py to test_continuous.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_nexus.py to test_dataio_nexus.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_statistics.py to test_statistics.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataobject_tree_list.py to test_dataobject_tree_list.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_nexustokenizer.py to test_dataio_nexustokenizer.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_manips.py to test_tree_manips.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_calcs.py to test_tree_calcs.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/pathmap.py to pathmap.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/runlevel.py to runlevel.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/nexmlvalidator.py to nexmlvalidator.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/extendedtest.py to extendedtest.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/datagen.py to datagen.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/generate_reference_tree.py to generate_reference_tree.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/tree_parse_speed.py to tree_parse_speed.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/coverage_analysis.py to coverage_analysis.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/generate_pruned_trees.py to generate_pruned_trees.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/support/datatest.py to datatest.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataobject_tree.py to test_dataobject_tree.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_coalescent.py to test_coalescent.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_popgenstat.py to test_popgenstat.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataobject_cloning.py to test_dataobject_cloning.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_phylip.py to test_dataio_phylip.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_containers.py to test_containers.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_from_splits.py to test_tree_from_splits.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_sims.py to test_tree_sims.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataobject_dataset.py to test_dataobject_dataset.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_datagen.py to test_datagen.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_sums.py to test_tree_sums.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_linearalg.py to test_linearalg.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_split_masking.py to test_split_masking.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_biopython.py to test_biopython.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_paup.py to test_paup.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_nexml.py to test_dataio_nexml.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_tree_structuring.py to test_tree_structuring.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataobject_taxon.py to test_dataobject_taxon.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_seqsim.py to test_seqsim.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_ape.py to test_ape.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_reconcile.py to test_reconcile.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_dataio_indexing.py to test_dataio_indexing.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_splits_on_incomplete_leaf_sets.py to test_splits_on_incomplete_leaf_sets.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/test/test_ete.py to test_ete.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject/tree.py to tree.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject/__init__.py to __init__.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject/dataset.py to dataset.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject/base.py to base.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject/char.py to char.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/dataobject/taxon.py to taxon.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/scm.py to scm.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/treesim.py to treesim.pyc byte-compiling build/bdist.freebsd-11.0-CURRENT-powerpc/egg/dendropy/continuous.py to continuous.pyc creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO installing scripts to build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts running install_scripts running build_scripts creating build/scripts-2.7 copying and adjusting scripts/sumtrees/sumtrees.py -> build/scripts-2.7 copying and adjusting scripts/sumtrees/cattrees.py -> build/scripts-2.7 copying and adjusting scripts/sumtrees/sumlabels.py -> build/scripts-2.7 copying and adjusting scripts/calculators/strict_consensus_merge.py -> build/scripts-2.7 copying and adjusting scripts/calculators/long_branch_symmdiff.py -> build/scripts-2.7 changing mode of build/scripts-2.7/sumtrees.py from 644 to 755 changing mode of build/scripts-2.7/cattrees.py from 644 to 755 changing mode of build/scripts-2.7/sumlabels.py from 644 to 755 changing mode of build/scripts-2.7/strict_consensus_merge.py from 644 to 755 changing mode of build/scripts-2.7/long_branch_symmdiff.py from 644 to 755 creating build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts copying build/scripts-2.7/sumlabels.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts copying build/scripts-2.7/strict_consensus_merge.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts copying build/scripts-2.7/sumtrees.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts copying build/scripts-2.7/cattrees.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts copying build/scripts-2.7/long_branch_symmdiff.py -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts changing mode of build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts/sumlabels.py to 755 changing mode of build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts/strict_consensus_merge.py to 755 changing mode of build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts/sumtrees.py to 755 changing mode of build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts/cattrees.py to 755 changing mode of build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO/scripts/long_branch_symmdiff.py to 755 copying DendroPy.egg-info/PKG-INFO -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO copying DendroPy.egg-info/SOURCES.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO copying DendroPy.egg-info/dependency_links.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO copying DendroPy.egg-info/entry_points.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO copying DendroPy.egg-info/requires.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO copying DendroPy.egg-info/top_level.txt -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO copying DendroPy.egg-info/zip-safe -> build/bdist.freebsd-11.0-CURRENT-powerpc/egg/EGG-INFO creating dist creating 'dist/DendroPy-3.12.0-py2.7.egg' and adding 'build/bdist.freebsd-11.0-CURRENT-powerpc/egg' to it removing 'build/bdist.freebsd-11.0-CURRENT-powerpc/egg' (and everything under it) ===> Installing for py27-DendroPy-3.12.0 ===> py27-DendroPy-3.12.0 depends on package: py27-setuptools27>0 - found ===> py27-DendroPy-3.12.0 depends on file: /usr/local/bin/python2.7 - found ===> Generating temporary packing list ===> Checking if science/py-DendroPy already installed using setuptools ('/usr/local/lib/python2.7/site-packages/setuptools/__init__.pyc') searching for packages packages identified: dendropy : dendropy dendropy.mathlib : dendropy/mathlib dendropy.utility : dendropy/utility dendropy.interop : dendropy/interop dendropy.dataio : dendropy/dataio dendropy.test : dendropy/test dendropy.dataobject : dendropy/dataobject dendropy.test.support : dendropy/test/support scripts identified: scripts/sumtrees/sumtrees.py, scripts/sumtrees/cattrees.py, scripts/sumtrees/sumlabels.py, scripts/calculators/strict_consensus_merge.py, scripts/calculators/long_branch_symmdiff.py setuptools command extensions are available coverage could not be imported: test coverage analysis not available coverage analysis not available running easy_install Processing DendroPy-3.12.0-py2.7.egg Copying DendroPy-3.12.0-py2.7.egg to /usr/local/lib/python2.7/site-packages Adding DendroPy 3.12.0 to easy-install.pth file Installing cattrees.py script to /usr/local/bin Installing strict_consensus_merge.py script to /usr/local/bin Installing sumtrees.py script to /usr/local/bin Installing sumlabels.py script to /usr/local/bin Installing long_branch_symmdiff.py script to /usr/local/bin Installed /usr/local/lib/python2.7/site-packages/DendroPy-3.12.0-py2.7.egg writing list of installed files to '/obj/buildshare/ports/355755/science/py-DendroPy/work/.PLIST.pymodtmp' ************************************************************************ If you use this library either in whole or in part in your analysis, or use any code derived from it, please cite it as: Sukumaran, J. and Mark T. Holder. 2010. DendroPy: A Python library for phylogenetic computing. Bioinformatics 26: 1569-1571. ************************************************************************ ===> Registering installation for py27-DendroPy-3.12.0 Installing py27-DendroPy-3.12.0... done Make package ===> Building package for py27-DendroPy-3.12.0 Creating package for py27-DendroPy-3.12.0 slot2: removed