Building openbabel-2.3.2_1.txz (origin /buildshare/ports/355755/science/openbabel) for powerpc-10-0 on XXX slot1: created x distfiles/ x distfiles/openbabel-2.3.2.tar.gz x packages/ x packages/gmake-3.82_1.txz x packages/eigen-3.2.1.txz x packages/pkg-1.2.7_2.txz x packages/cmake-2.8.12.1_4.txz x packages/gettext-0.18.3.1_1.txz x packages/python27-2.7.6_4.txz x packages/cmake-modules-2.8.12.1_1.txz x packages/pkgconf-0.9.5.txz x packages/libxml2-2.9.1_1.txz ELF ldconfig path: /lib /usr/lib /usr/lib/compat Make depends ===> openbabel-2.3.2_1 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /buildshare/ports/355755/ports-mgmt/pkg ===> Installing existing package /packages/pkg-1.2.7_2.txz Installing pkg-1.2.7_2... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of openbabel-2.3.2_1 ===> openbabel-2.3.2_1 depends on shared library: libxml2.so - not found ===> Verifying for libxml2.so in /buildshare/ports/355755/textproc/libxml2 ===> Installing existing package /packages/libxml2-2.9.1_1.txz Installing libxml2-2.9.1_1... done ===> Returning to build of openbabel-2.3.2_1 ===> openbabel-2.3.2_1 depends on file: /usr/local/include/eigen3/Eigen/Eigen - not found ===> Verifying install for /usr/local/include/eigen3/Eigen/Eigen in /buildshare/ports/355755/math/eigen3 ===> Installing existing package /packages/eigen-3.2.1.txz Installing eigen-3.2.1... done ===> Returning to build of openbabel-2.3.2_1 ===> openbabel-2.3.2_1 depends on file: /usr/local/bin/python2.7 - not found ===> Verifying install for /usr/local/bin/python2.7 in /buildshare/ports/355755/lang/python27 ===> Installing existing package /packages/python27-2.7.6_4.txz Installing python27-2.7.6_4...Installing gettext-0.18.3.1_1... done done ==== Note that some of the standard modules are provided as separate ports since they require extra dependencies: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Install them as needed. ==== ===> Returning to build of openbabel-2.3.2_1 ===> openbabel-2.3.2_1 depends on file: /usr/local/bin/cmake - not found ===> Verifying install for /usr/local/bin/cmake in /buildshare/ports/355755/devel/cmake ===> Installing existing package /packages/cmake-2.8.12.1_4.txz Installing cmake-2.8.12.1_4...Installing cmake-modules-2.8.12.1_1... done done ===> Returning to build of openbabel-2.3.2_1 ===> openbabel-2.3.2_1 depends on file: /usr/local/bin/python2.7 - found Make install ===> openbabel-2.3.2_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by openbabel-2.3.2_1 for building ===> Extracting for openbabel-2.3.2_1 => SHA256 Checksum OK for openbabel-2.3.2.tar.gz. ===> Patching for openbabel-2.3.2_1 ===> Applying FreeBSD patches for openbabel-2.3.2_1 /usr/bin/sed -i.bak -e '/find_package(Cairo)/d' /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/CMakeLists.txt /usr/bin/sed -i.bak -e '/pkgconfig/s,${LIB_INSTALL_DIR},libdata,' /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/CMakeLists.txt /usr/bin/sed -i.bak -e 's,share/man,man,' /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/doc/CMakeLists.txt ===> openbabel-2.3.2_1 depends on file: /usr/local/include/eigen3/Eigen/Eigen - found ===> openbabel-2.3.2_1 depends on file: /usr/local/bin/python2.7 - found ===> openbabel-2.3.2_1 depends on file: /usr/local/bin/cmake - found ===> openbabel-2.3.2_1 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so.2.9.1) ===> Configuring for openbabel-2.3.2_1 ===> Performing out-of-source build /bin/mkdir -p /obj/buildshare/ports/355755/science/openbabel/work/.build -- The C compiler identification is GNU 4.2.1 -- The CXX compiler identification is GNU 4.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Using included inchi library. -- Found LibXml2: /usr/local/lib/libxml2.so (found version "2.9.1") -- Found ZLIB: /usr/lib/libz.so (found version "1.2.8") -- Could NOT find wxWidgets (missing: wxWidgets_FOUND) -- Looking for conio.h -- Looking for conio.h - not found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for rpc/xdr.h -- Looking for rpc/xdr.h - not found -- Looking for regex.h -- Looking for regex.h - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for rint -- Looking for rint - not found -- Looking for snprintf -- Looking for snprintf - found -- Looking for sranddev -- Looking for sranddev - found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for dlopen in dl -- Looking for dlopen in dl - not found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of clock_t -- Check size of clock_t - done -- Performing Test SCANDIR_NEEDS_CONST -- Performing Test SCANDIR_NEEDS_CONST - Failed -- Performing Test HAVE_GCC_VISIBILITY -- Performing Test HAVE_GCC_VISIBILITY - Success -- Found Eigen3: /usr/local/include/eigen3 (Required is at least version "2.91.0") -- Could NOT find Cairo. PNG output will NOT be supported. -- Looking for getopt -- Looking for getopt - found -- GUI will not be built CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:14 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:31 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:25 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:39 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/local/bin/python2.7 (found suitable version "2.7.6", minimum required is "2.7") -- Found PythonLibs: /usr/local/lib/libpython2.7.so (found suitable version "2.7.6", minimum required is "2.7") -- Python bindings will be compiled -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_DEBUG THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /obj/buildshare/ports/355755/science/openbabel/work/.build ===> Building for openbabel-2.3.2_1 /usr/local/bin/cmake -H/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 -B/obj/buildshare/ports/355755/science/openbabel/work/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src /obj/buildshare/ports/355755/science/openbabel/work/.build/src/CMakeFiles/openbabel.dir/DependInfo.cmake Scanning dependencies of target openbabel /usr/bin/make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/alias.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/alias.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/alias.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 42 [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/atom.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/atom.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/atom.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/base.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/base.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/base.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/bitvec.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/bitvec.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 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cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/chains.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/chains.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/data.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/data.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data 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-fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/oberror.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/oberror.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/obiter.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/obiter.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/obiter.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 51 [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/openbabel.dir/obutil.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/obutil.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/op.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/fingerprints/finger3.cpp Linking CXX shared module ../lib/plugin_fingerprints.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,plugin_fingerprints.so -o ../lib/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -lm -lz ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report 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-I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_ops.dir/ops/addfilename.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/addfilename.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dplugin_ops_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_ops.dir/ops/addinindex.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/addinindex.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dplugin_ops_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data 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-I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_ops.dir/ops/readconformers.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/readconformers.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 73 [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dplugin_ops_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_ops.dir/ops/sort.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/sort.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dplugin_ops_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_ops.dir/ops/opisomorph.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/opisomorph.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dplugin_ops_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_ops.dir/ops/ophighlight.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/ophighlight.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 74 [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dplugin_ops_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o 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/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/conformer.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dplugin_ops_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/plugin_ops.dir/ops/opalign.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/ops/opalign.cpp Linking CXX shared module ../lib/plugin_ops.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,plugin_ops.so -o ../lib/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.o CMakeFiles/plugin_ops.dir/ops/addinindex.o CMakeFiles/plugin_ops.dir/ops/addpolarh.o CMakeFiles/plugin_ops.dir/ops/canonical.o CMakeFiles/plugin_ops.dir/ops/gen2D.o CMakeFiles/plugin_ops.dir/ops/fillUC.o CMakeFiles/plugin_ops.dir/ops/forcefield.o CMakeFiles/plugin_ops.dir/ops/gen3d.o CMakeFiles/plugin_ops.dir/ops/largest.o CMakeFiles/plugin_ops.dir/ops/loader.o CMakeFiles/plugin_ops.dir/ops/optransform.o CMakeFiles/plugin_ops.dir/ops/partialcharges.o CMakeFiles/plugin_ops.dir/ops/readconformers.o CMakeFiles/plugin_ops.dir/ops/sort.o CMakeFiles/plugin_ops.dir/ops/opisomorph.o CMakeFiles/plugin_ops.dir/ops/ophighlight.o CMakeFiles/plugin_ops.dir/ops/xout.o CMakeFiles/plugin_ops.dir/ops/conformer.o CMakeFiles/plugin_ops.dir/ops/opalign.o -lm -lz ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 69 70 71 72 73 74 [ 31%] Built target plugin_ops /usr/bin/make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi/CMakeFiles/inchi.dir/DependInfo.cmake Scanning dependencies of target inchi /usr/bin/make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 19 [ 32%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiqueu.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichiqueu.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichiqueu.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 32%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/inchi_dll.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/inchi_dll.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 21 [ 34%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicans.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichicans.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichicans.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 34%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_base26.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ikey_base26.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ikey_base26.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 34%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichilnct.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichilnct.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichilnct.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 22 [ 35%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr7.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichirvr7.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichirvr7.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 35%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichirvr5.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichirvr5.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 35%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichirvr3.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichirvr3.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 23 [ 36%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap4.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichimap4.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichimap4.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 36%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap2.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichimap2.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichimap2.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 36%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichimap1.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichimap1.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 36%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/inchi_dll_a.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/inchi_dll_a.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 24 [ 37%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichisort.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichisort.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichisort.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 37%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt3.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include 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-I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/inchi_dll_main.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/inchi_dll_main.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 26 [ 39%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiread.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe 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-fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichister.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichister.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 40%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichitaut.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichitaut.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichitaut.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 28 [ 41%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_bns.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichi_bns.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichi_bns.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 41%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/sha2.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/sha2.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/sha2.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 41%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichirvr6.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichirvr6.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 41%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr4.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichirvr4.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichirvr4.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 29 [ 42%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichirvr2.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichirvr2.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 42%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr1.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchi.dir/ichirvr1.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/libinchi/ichirvr1.c /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 42%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a2.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -D_USRDLL -O2 -pipe -fno-strict-aliasing -O2 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CMakeFiles/inchi.dir/ichirvr4.o CMakeFiles/inchi.dir/ichirvr2.o CMakeFiles/inchi.dir/ichirvr1.o CMakeFiles/inchi.dir/inchi_dll_a2.o CMakeFiles/inchi.dir/ichiprt2.o CMakeFiles/inchi.dir/util.o CMakeFiles/inchi.dir/ichiprt1.o CMakeFiles/inchi.dir/ichi_io.o -lm -lz -lc -Wl,-rpath,:::::::::::::: cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/libinchi && /usr/local/bin/cmake -E cmake_symlink_library ../../../lib/libinchi.so.0.4.1 ../../../lib/libinchi.so.0 ../../../lib/libinchi.so /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 19 20 21 22 23 24 25 26 27 28 29 30 31 [ 44%] Built target inchi /usr/bin/make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake Scanning dependencies of target APIInterface /usr/bin/make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 44%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/bin/c++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/APIInterface.dir/APIInterface.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/APIInterface.cpp Linking CXX shared module ../../lib/APIInterface.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,APIInterface.so -o ../../lib/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.o -lm -lz 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CMakeFiles/CSRformat.dir/CSRformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/CSRformat.cpp Linking CXX shared module ../../lib/CSRformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,CSRformat.so -o ../../lib/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 44%] Built target CSRformat /usr/bin/make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake Scanning dependencies of target MCDLformat /usr/bin/make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 44%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/MNAformat.dir/MNAformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/MNAformat.cpp Linking CXX shared module ../../lib/MNAformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,MNAformat.so -o ../../lib/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 1 [ 45%] Built target MNAformat /usr/bin/make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake Scanning dependencies of target PQSformat /usr/bin/make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 45%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.o cd 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-I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/amberformat.dir/amberformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/amberformat.cpp Linking CXX shared module ../../lib/amberformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,amberformat.so -o ../../lib/amberformat.so CMakeFiles/amberformat.dir/amberformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/cacaoformat.dir/cacaoformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/cacaoformat.cpp Linking CXX shared module ../../lib/cacaoformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,cacaoformat.so -o ../../lib/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: 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cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,cccformat.so -o ../../lib/cccformat.so CMakeFiles/cccformat.dir/cccformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 7 [ 50%] Built target cccformat /usr/bin/make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/xml/cdxmlformat.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 50%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dcdxmlformat_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/cdxmlformat.dir/xml/xml.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/xml/xml.cpp Linking CXX shared module ../../lib/cdxmlformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,cdxmlformat.so -o ../../lib/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o CMakeFiles/cdxmlformat.dir/xml/xml.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm /usr/local/lib/libxml2.so ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib:/usr/local/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 50%] Built target cdxmlformat /usr/bin/make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake Scanning dependencies of target chem3dformat /usr/bin/make -f 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-fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,chemdrawcdx.so -o ../../lib/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 51%] Built target chemdrawcdx /usr/bin/make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats 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-I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/chemdrawct.dir/chemdrawct.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/chemdrawct.cpp Linking CXX shared module ../../lib/chemdrawct.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,chemdrawct.so -o ../../lib/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report 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-I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/fastaformat.dir/fastaformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/fastaformat.cpp Linking CXX shared module ../../lib/fastaformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,fastaformat.so -o ../../lib/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report 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/obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake Scanning dependencies of target gulpformat /usr/bin/make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 61%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dgulpformat_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include 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-DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dinchiformat_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/inchiformat.dir/getinchi.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp: In function 'bool OpenBabel::isnic(char)': /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:36: warning: comparison is always false due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp: In function 'std::string OpenBabel::GetInChI(std::istream&)': /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:166: warning: comparison is always true due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:170: warning: comparison is always true due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:196: warning: comparison is always false due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:210: warning: comparison is always true due to limited range of data type /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 32 [ 62%] Building CXX object 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-I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/lmpdatformat.dir/lmpdatformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/lmpdatformat.cpp Linking CXX shared module ../../lib/lmpdatformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,lmpdatformat.so -o ../../lib/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 62%] Built target lmpdatformat /usr/bin/make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake Scanning dependencies of target mdlformat /usr/bin/make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 33 [ 63%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.o cd 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cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,mdlformat.so -o ../../lib/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 33 [ 63%] Built target mdlformat /usr/bin/make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake Scanning dependencies of target mmcifformat /usr/bin/make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 63%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dmmcifformat_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/mmcifformat.dir/mmcifformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/mmcifformat.cpp Linking CXX shared module ../../lib/mmcifformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,mmcifformat.so -o ../../lib/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 63%] Built target mmcifformat /usr/bin/make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake Scanning dependencies of target mmodformat /usr/bin/make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build 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-Wl,-soname,mol2format.so -o ../../lib/mol2format.so CMakeFiles/mol2format.dir/mol2format.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 63%] Built target mol2format /usr/bin/make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats 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-I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/moldenformat.dir/moldenformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/moldenformat.cpp Linking CXX shared module ../../lib/moldenformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,moldenformat.so -o ../../lib/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report 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../../lib/molreport.so CMakeFiles/molreport.dir/molreport.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 64%] Built target molreport /usr/bin/make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake Scanning 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cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,mpdformat.so -o ../../lib/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 65%] Built target mpdformat /usr/bin/make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/mpqcformat.dir/mpqcformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/mpqcformat.cpp Linking CXX shared module ../../lib/mpqcformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,mpqcformat.so -o ../../lib/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: 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--verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,nwchemformat.so -o ../../lib/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 37 [ 67%] Built target nwchemformat /usr/bin/make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build 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-I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/opendxformat.dir/opendxformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/opendxformat.cpp Linking CXX shared module ../../lib/opendxformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,opendxformat.so -o ../../lib/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: 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-fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/pcmodelformat.dir/pcmodelformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/pcmodelformat.cpp Linking CXX shared module ../../lib/pcmodelformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,pcmodelformat.so -o ../../lib/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 68%] Built target pcmodelformat /usr/bin/make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake 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-Wl,-soname,reportformat.so -o ../../lib/reportformat.so CMakeFiles/reportformat.dir/reportformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 72%] Built target reportformat /usr/bin/make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats 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-I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/rsmiformat.dir/rsmiformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/rsmiformat.cpp Linking CXX shared module ../../lib/rsmiformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,rsmiformat.so -o ../../lib/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.o -lm -lz ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report 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-I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/shelxformat.dir/shelxformat.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/shelxformat.cpp Linking CXX shared module ../../lib/shelxformat.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,shelxformat.so -o ../../lib/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.o -lm -lz 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src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 79 [ 74%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dsmilesformat_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include/inchi -I/usr/local/include/libxml2 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../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.4.0.2 -lc -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 79 [ 74%] Built target smilesformat /usr/bin/make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake Scanning dependencies of target svgformat /usr/bin/make -f 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tools/CMakeFiles/obgen.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/tools /obj/buildshare/ports/355755/science/openbabel/work/.build/tools/CMakeFiles/obgen.dir/DependInfo.cmake Scanning dependencies of target obgen /usr/bin/make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 80%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 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Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/tools /obj/buildshare/ports/355755/science/openbabel/work/.build/tools/CMakeFiles/obprobe.dir/DependInfo.cmake Scanning dependencies of target obprobe /usr/bin/make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 81%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/obprobe.dir/obprobe.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools/obprobe.cpp Linking CXX executable ../bin/obprobe cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/obprobe.dir/obprobe.o -o ../bin/obprobe ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 81%] Built target obprobe /usr/bin/make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/tools /obj/buildshare/ports/355755/science/openbabel/work/.build/tools/CMakeFiles/obprop.dir/DependInfo.cmake Scanning dependencies of target obprop /usr/bin/make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 40 [ 82%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/obprop.dir/obprop.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools/obprop.cpp Linking CXX executable ../bin/obprop cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/obprop.dir/obprop.o -o ../bin/obprop ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 40 [ 82%] Built target obprop /usr/bin/make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/tools /obj/buildshare/ports/355755/science/openbabel/work/.build/tools/CMakeFiles/obrms.dir/DependInfo.cmake Scanning dependencies of target obrms /usr/bin/make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 82%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/obrms.dir/obrms.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools/obrms.cpp Linking CXX executable ../bin/obrms cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/obrms.dir/obrms.o -o ../bin/obrms ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 82%] Built target obrms /usr/bin/make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/tools /obj/buildshare/ports/355755/science/openbabel/work/.build/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake Scanning dependencies of target obrotamer /usr/bin/make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 82%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/obrotamer.dir/obrotamer.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools/obrotamer.cpp Linking CXX executable ../bin/obrotamer cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/obrotamer.dir/obrotamer.o -o ../bin/obrotamer ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 82%] Built target obrotamer /usr/bin/make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/tools /obj/buildshare/ports/355755/science/openbabel/work/.build/tools/CMakeFiles/obrotate.dir/DependInfo.cmake Scanning dependencies of target obrotate /usr/bin/make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 41 [ 83%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/obrotate.dir/obrotate.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools/obrotate.cpp Linking CXX executable ../bin/obrotate cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/obrotate.dir/obrotate.o -o ../bin/obrotate ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 41 [ 83%] Built target obrotate /usr/bin/make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/tools /obj/buildshare/ports/355755/science/openbabel/work/.build/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake Scanning dependencies of target obspectrophore /usr/bin/make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 83%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/obspectrophore.dir/obspectrophore.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/tools/obspectrophore.cpp Linking CXX executable ../bin/obspectrophore cd /obj/buildshare/ports/355755/science/openbabel/work/.build/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/obspectrophore.dir/obspectrophore.o -o ../bin/obspectrophore ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 83%] Built target obspectrophore /usr/bin/make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/roundtrip.dir/DependInfo.cmake Scanning dependencies of target roundtrip /usr/bin/make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 83%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/roundtrip.dir/roundtrip.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/roundtrip.cpp Linking CXX executable ../bin/roundtrip cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/roundtrip.dir/roundtrip.o -o ../bin/roundtrip ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 83%] Built target roundtrip /usr/bin/make -f test/CMakeFiles/test_aromatest.dir/build.make test/CMakeFiles/test_aromatest.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_aromatest.dir/DependInfo.cmake Scanning dependencies of target test_aromatest /usr/bin/make -f test/CMakeFiles/test_aromatest.dir/build.make test/CMakeFiles/test_aromatest.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 83%] Building CXX object test/CMakeFiles/test_aromatest.dir/aromatest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_aromatest.dir/aromatest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/aromatest.cpp Linking CXX executable ../bin/test_aromatest cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_aromatest.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_aromatest.dir/aromatest.o -o ../bin/test_aromatest ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 83%] Built target test_aromatest /usr/bin/make -f test/CMakeFiles/test_atom.dir/build.make test/CMakeFiles/test_atom.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_atom.dir/DependInfo.cmake Scanning dependencies of target test_atom /usr/bin/make -f test/CMakeFiles/test_atom.dir/build.make test/CMakeFiles/test_atom.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 80 [ 84%] Building CXX object test/CMakeFiles/test_atom.dir/atom.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_atom.dir/atom.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/atom.cpp Linking CXX executable ../bin/test_atom cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_atom.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_atom.dir/atom.o -o ../bin/test_atom ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 80 [ 84%] Built target test_atom /usr/bin/make -f test/CMakeFiles/test_automorphism.dir/build.make test/CMakeFiles/test_automorphism.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_automorphism.dir/DependInfo.cmake Scanning dependencies of target test_automorphism /usr/bin/make -f test/CMakeFiles/test_automorphism.dir/build.make test/CMakeFiles/test_automorphism.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 84%] Building CXX object test/CMakeFiles/test_automorphism.dir/automorphismtest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_automorphism.dir/automorphismtest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/automorphismtest.cpp Linking CXX executable ../bin/test_automorphism cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_automorphism.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_automorphism.dir/automorphismtest.o -o ../bin/test_automorphism ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 84%] Built target test_automorphism /usr/bin/make -f test/CMakeFiles/test_bond.dir/build.make test/CMakeFiles/test_bond.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_bond.dir/DependInfo.cmake Scanning dependencies of target test_bond /usr/bin/make -f test/CMakeFiles/test_bond.dir/build.make test/CMakeFiles/test_bond.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 84%] Building CXX object test/CMakeFiles/test_bond.dir/bond.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_bond.dir/bond.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/bond.cpp Linking CXX executable ../bin/test_bond cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_bond.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_bond.dir/bond.o -o ../bin/test_bond ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 84%] Built target test_bond /usr/bin/make -f test/CMakeFiles/test_builder.dir/build.make test/CMakeFiles/test_builder.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_builder.dir/DependInfo.cmake Scanning dependencies of target test_builder /usr/bin/make -f test/CMakeFiles/test_builder.dir/build.make test/CMakeFiles/test_builder.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 84%] Building CXX object test/CMakeFiles/test_builder.dir/buildertest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_builder.dir/buildertest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/buildertest.cpp Linking CXX executable ../bin/test_builder cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_builder.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_builder.dir/buildertest.o -o ../bin/test_builder ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 84%] Built target test_builder /usr/bin/make -f test/CMakeFiles/test_canonconsistent.dir/build.make test/CMakeFiles/test_canonconsistent.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_canonconsistent.dir/DependInfo.cmake Scanning dependencies of target test_canonconsistent /usr/bin/make -f test/CMakeFiles/test_canonconsistent.dir/build.make test/CMakeFiles/test_canonconsistent.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 81 [ 85%] Building CXX object test/CMakeFiles/test_canonconsistent.dir/canonconsistenttest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_canonconsistent.dir/canonconsistenttest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/canonconsistenttest.cpp Linking CXX executable ../bin/test_canonconsistent cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_canonconsistent.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_canonconsistent.dir/canonconsistenttest.o -o ../bin/test_canonconsistent ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 81 [ 85%] Built target test_canonconsistent /usr/bin/make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_canonstable.dir/DependInfo.cmake Scanning dependencies of target test_canonstable /usr/bin/make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 85%] Building CXX object test/CMakeFiles/test_canonstable.dir/canonstabletest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_canonstable.dir/canonstabletest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/canonstabletest.cpp Linking CXX executable ../bin/test_canonstable cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_canonstable.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_canonstable.dir/canonstabletest.o -o ../bin/test_canonstable ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 85%] Built target test_canonstable /usr/bin/make -f test/CMakeFiles/test_cansmi.dir/build.make test/CMakeFiles/test_cansmi.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_cansmi.dir/DependInfo.cmake Scanning dependencies of target test_cansmi /usr/bin/make -f test/CMakeFiles/test_cansmi.dir/build.make test/CMakeFiles/test_cansmi.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 85%] Building CXX object test/CMakeFiles/test_cansmi.dir/cansmi.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_cansmi.dir/cansmi.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/cansmi.cpp Linking CXX executable ../bin/test_cansmi cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_cansmi.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_cansmi.dir/cansmi.o -o ../bin/test_cansmi ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 85%] Built target test_cansmi /usr/bin/make -f test/CMakeFiles/test_charge-gasteiger.dir/build.make test/CMakeFiles/test_charge-gasteiger.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_charge-gasteiger.dir/DependInfo.cmake Scanning dependencies of target test_charge-gasteiger /usr/bin/make -f test/CMakeFiles/test_charge-gasteiger.dir/build.make test/CMakeFiles/test_charge-gasteiger.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 82 [ 86%] Building CXX object test/CMakeFiles/test_charge-gasteiger.dir/charge-gasteiger.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_charge-gasteiger.dir/charge-gasteiger.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/charge-gasteiger.cpp Linking CXX executable ../bin/test_charge-gasteiger cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_charge-gasteiger.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_charge-gasteiger.dir/charge-gasteiger.o -o ../bin/test_charge-gasteiger ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 82 [ 86%] Built target test_charge-gasteiger /usr/bin/make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_charge-mmff94.dir/DependInfo.cmake Scanning dependencies of target test_charge-mmff94 /usr/bin/make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 86%] Building CXX object test/CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/charge-mmff94.cpp Linking CXX executable ../bin/test_charge-mmff94 cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_charge-mmff94.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o -o ../bin/test_charge-mmff94 ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 86%] Built target test_charge-mmff94 /usr/bin/make -f test/CMakeFiles/test_cistrans.dir/build.make test/CMakeFiles/test_cistrans.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_cistrans.dir/DependInfo.cmake Scanning dependencies of target test_cistrans /usr/bin/make -f test/CMakeFiles/test_cistrans.dir/build.make test/CMakeFiles/test_cistrans.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 86%] Building CXX object test/CMakeFiles/test_cistrans.dir/cistranstest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_cistrans.dir/cistranstest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/cistranstest.cpp Linking CXX executable ../bin/test_cistrans cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_cistrans.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_cistrans.dir/cistranstest.o -o ../bin/test_cistrans ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 86%] Built target test_cistrans /usr/bin/make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_conversion.dir/DependInfo.cmake Scanning dependencies of target test_conversion /usr/bin/make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 83 [ 87%] Building CXX object test/CMakeFiles/test_conversion.dir/conversion.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_conversion.dir/conversion.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/conversion.cpp Linking CXX executable ../bin/test_conversion cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_conversion.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_conversion.dir/conversion.o -o ../bin/test_conversion ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 83 [ 87%] Built target test_conversion /usr/bin/make -f test/CMakeFiles/test_datatest.dir/build.make test/CMakeFiles/test_datatest.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_datatest.dir/DependInfo.cmake Scanning dependencies of target test_datatest /usr/bin/make -f test/CMakeFiles/test_datatest.dir/build.make test/CMakeFiles/test_datatest.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 87%] Building CXX object test/CMakeFiles/test_datatest.dir/datatest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_datatest.dir/datatest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/datatest.cpp Linking CXX executable ../bin/test_datatest cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_datatest.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_datatest.dir/datatest.o -o ../bin/test_datatest ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 87%] Built target test_datatest /usr/bin/make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_ffgaff.dir/DependInfo.cmake Scanning dependencies of target test_ffgaff /usr/bin/make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 87%] Building CXX object test/CMakeFiles/test_ffgaff.dir/ffgaff.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_ffgaff.dir/ffgaff.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/ffgaff.cpp Linking CXX executable ../bin/test_ffgaff cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_ffgaff.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_ffgaff.dir/ffgaff.o -o ../bin/test_ffgaff ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 87%] Built target test_ffgaff /usr/bin/make -f test/CMakeFiles/test_ffghemical.dir/build.make test/CMakeFiles/test_ffghemical.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_ffghemical.dir/DependInfo.cmake Scanning dependencies of target test_ffghemical /usr/bin/make -f test/CMakeFiles/test_ffghemical.dir/build.make test/CMakeFiles/test_ffghemical.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 84 [ 88%] Building CXX object test/CMakeFiles/test_ffghemical.dir/ffghemical.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_ffghemical.dir/ffghemical.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/ffghemical.cpp Linking CXX executable ../bin/test_ffghemical cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_ffghemical.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_ffghemical.dir/ffghemical.o -o ../bin/test_ffghemical ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 84 [ 88%] Built target test_ffghemical /usr/bin/make -f test/CMakeFiles/test_ffmmff94.dir/build.make test/CMakeFiles/test_ffmmff94.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_ffmmff94.dir/DependInfo.cmake Scanning dependencies of target test_ffmmff94 /usr/bin/make -f test/CMakeFiles/test_ffmmff94.dir/build.make test/CMakeFiles/test_ffmmff94.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 88%] Building CXX object test/CMakeFiles/test_ffmmff94.dir/ffmmff94.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_ffmmff94.dir/ffmmff94.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/ffmmff94.cpp Linking CXX executable ../bin/test_ffmmff94 cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_ffmmff94.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_ffmmff94.dir/ffmmff94.o -o ../bin/test_ffmmff94 ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 88%] Built target test_ffmmff94 /usr/bin/make -f test/CMakeFiles/test_ffuff.dir/build.make test/CMakeFiles/test_ffuff.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_ffuff.dir/DependInfo.cmake Scanning dependencies of target test_ffuff /usr/bin/make -f test/CMakeFiles/test_ffuff.dir/build.make test/CMakeFiles/test_ffuff.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 88%] Building CXX object test/CMakeFiles/test_ffuff.dir/ffuff.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_ffuff.dir/ffuff.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/ffuff.cpp Linking CXX executable ../bin/test_ffuff cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_ffuff.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_ffuff.dir/ffuff.o -o ../bin/test_ffuff ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 88%] Built target test_ffuff /usr/bin/make -f test/CMakeFiles/test_formalcharge.dir/build.make test/CMakeFiles/test_formalcharge.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_formalcharge.dir/DependInfo.cmake Scanning dependencies of target test_formalcharge /usr/bin/make -f test/CMakeFiles/test_formalcharge.dir/build.make test/CMakeFiles/test_formalcharge.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 85 [ 89%] Building CXX object test/CMakeFiles/test_formalcharge.dir/formalcharge.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_formalcharge.dir/formalcharge.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/formalcharge.cpp Linking CXX executable ../bin/test_formalcharge cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_formalcharge.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_formalcharge.dir/formalcharge.o -o ../bin/test_formalcharge ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 85 [ 89%] Built target test_formalcharge /usr/bin/make -f test/CMakeFiles/test_format.dir/build.make test/CMakeFiles/test_format.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_format.dir/DependInfo.cmake Scanning dependencies of target test_format /usr/bin/make -f test/CMakeFiles/test_format.dir/build.make test/CMakeFiles/test_format.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 89%] Building CXX object test/CMakeFiles/test_format.dir/format.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_format.dir/format.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/format.cpp Linking CXX executable ../bin/test_format cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_format.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_format.dir/format.o -o ../bin/test_format ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 89%] Built target test_format /usr/bin/make -f test/CMakeFiles/test_formula.dir/build.make test/CMakeFiles/test_formula.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_formula.dir/DependInfo.cmake Scanning dependencies of target test_formula /usr/bin/make -f test/CMakeFiles/test_formula.dir/build.make test/CMakeFiles/test_formula.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 89%] Building CXX object test/CMakeFiles/test_formula.dir/formula.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_formula.dir/formula.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/formula.cpp Linking CXX executable ../bin/test_formula cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_formula.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_formula.dir/formula.o -o ../bin/test_formula ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 89%] Built target test_formula /usr/bin/make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_graphsym.dir/DependInfo.cmake Scanning dependencies of target test_graphsym /usr/bin/make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 89%] Building CXX object test/CMakeFiles/test_graphsym.dir/graphsymtest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_graphsym.dir/graphsymtest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/graphsymtest.cpp Linking CXX executable ../bin/test_graphsym cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_graphsym.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_graphsym.dir/graphsymtest.o -o ../bin/test_graphsym ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 89%] Built target test_graphsym /usr/bin/make -f test/CMakeFiles/test_implicitH.dir/build.make test/CMakeFiles/test_implicitH.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_implicitH.dir/DependInfo.cmake Scanning dependencies of target test_implicitH /usr/bin/make -f test/CMakeFiles/test_implicitH.dir/build.make test/CMakeFiles/test_implicitH.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 86 [ 90%] Building CXX object test/CMakeFiles/test_implicitH.dir/implicitHtest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_implicitH.dir/implicitHtest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/implicitHtest.cpp Linking CXX executable ../bin/test_implicitH cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_implicitH.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_implicitH.dir/implicitHtest.o -o ../bin/test_implicitH ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 86 [ 90%] Built target test_implicitH /usr/bin/make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake Scanning dependencies of target test_inchiwrite /usr/bin/make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 90%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_inchiwrite.dir/inchiwrite.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/inchiwrite.cpp /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 90%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp: In function 'bool OpenBabel::isnic(char)': /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:36: warning: comparison is always false due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp: In function 'std::string OpenBabel::GetInChI(std::istream&)': /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:166: warning: comparison is always true due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:170: warning: comparison is always true due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:196: warning: comparison is always false due to limited range of data type /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp:210: warning: comparison is always true due to limited range of data type Linking CXX executable ../bin/test_inchiwrite cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_inchiwrite.dir/inchiwrite.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -o ../bin/test_inchiwrite ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 90%] Built target test_inchiwrite /usr/bin/make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_internalcoord.dir/DependInfo.cmake Scanning dependencies of target test_internalcoord /usr/bin/make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 87 [ 91%] Building CXX object test/CMakeFiles/test_internalcoord.dir/internalcoord.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_internalcoord.dir/internalcoord.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/internalcoord.cpp Linking CXX executable ../bin/test_internalcoord cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_internalcoord.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_internalcoord.dir/internalcoord.o -o ../bin/test_internalcoord ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 87 [ 91%] Built target test_internalcoord /usr/bin/make -f test/CMakeFiles/test_invalidsmarts.dir/build.make test/CMakeFiles/test_invalidsmarts.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_invalidsmarts.dir/DependInfo.cmake Scanning dependencies of target test_invalidsmarts /usr/bin/make -f test/CMakeFiles/test_invalidsmarts.dir/build.make test/CMakeFiles/test_invalidsmarts.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 91%] Building CXX object test/CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/invalidsmarts.cpp Linking CXX executable ../bin/test_invalidsmarts cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_invalidsmarts.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o -o ../bin/test_invalidsmarts ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 91%] Built target test_invalidsmarts /usr/bin/make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_invalidsmiles.dir/DependInfo.cmake Scanning dependencies of target test_invalidsmiles /usr/bin/make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 91%] Building CXX object test/CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/invalidsmiles.cpp Linking CXX executable ../bin/test_invalidsmiles cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_invalidsmiles.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o -o ../bin/test_invalidsmiles ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 91%] Built target test_invalidsmiles /usr/bin/make -f test/CMakeFiles/test_isomorphism.dir/build.make test/CMakeFiles/test_isomorphism.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_isomorphism.dir/DependInfo.cmake Scanning dependencies of target test_isomorphism /usr/bin/make -f test/CMakeFiles/test_isomorphism.dir/build.make test/CMakeFiles/test_isomorphism.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 88 [ 92%] Building CXX object test/CMakeFiles/test_isomorphism.dir/isomorphismtest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_isomorphism.dir/isomorphismtest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/isomorphismtest.cpp Linking CXX executable ../bin/test_isomorphism cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_isomorphism.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_isomorphism.dir/isomorphismtest.o -o ../bin/test_isomorphism ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 88 [ 92%] Built target test_isomorphism /usr/bin/make -f test/CMakeFiles/test_iterators.dir/build.make test/CMakeFiles/test_iterators.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_iterators.dir/DependInfo.cmake Scanning dependencies of target test_iterators /usr/bin/make -f test/CMakeFiles/test_iterators.dir/build.make test/CMakeFiles/test_iterators.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 92%] Building CXX object test/CMakeFiles/test_iterators.dir/iterators.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_iterators.dir/iterators.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/iterators.cpp Linking CXX executable ../bin/test_iterators cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_iterators.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_iterators.dir/iterators.o -o ../bin/test_iterators ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 92%] Built target test_iterators /usr/bin/make -f test/CMakeFiles/test_logp_psa.dir/build.make test/CMakeFiles/test_logp_psa.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_logp_psa.dir/DependInfo.cmake Scanning dependencies of target test_logp_psa /usr/bin/make -f test/CMakeFiles/test_logp_psa.dir/build.make test/CMakeFiles/test_logp_psa.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 92%] Building CXX object test/CMakeFiles/test_logp_psa.dir/logp_psa.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_logp_psa.dir/logp_psa.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/logp_psa.cpp Linking CXX executable ../bin/test_logp_psa cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_logp_psa.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_logp_psa.dir/logp_psa.o -o ../bin/test_logp_psa ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 92%] Built target test_logp_psa /usr/bin/make -f test/CMakeFiles/test_lssr.dir/build.make test/CMakeFiles/test_lssr.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_lssr.dir/DependInfo.cmake Scanning dependencies of target test_lssr /usr/bin/make -f test/CMakeFiles/test_lssr.dir/build.make test/CMakeFiles/test_lssr.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 89 [ 93%] Building CXX object test/CMakeFiles/test_lssr.dir/lssrtest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_lssr.dir/lssrtest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/lssrtest.cpp Linking CXX executable ../bin/test_lssr cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_lssr.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_lssr.dir/lssrtest.o -o ../bin/test_lssr ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 89 [ 93%] Built target test_lssr /usr/bin/make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_math.dir/DependInfo.cmake Scanning dependencies of target test_math /usr/bin/make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 93%] Building CXX object test/CMakeFiles/test_math.dir/math.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_math.dir/math.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/math.cpp Linking CXX executable ../bin/test_math cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_math.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_math.dir/math.o -o ../bin/test_math ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 93%] Built target test_math /usr/bin/make -f test/CMakeFiles/test_mol.dir/build.make test/CMakeFiles/test_mol.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_mol.dir/DependInfo.cmake Scanning dependencies of target test_mol /usr/bin/make -f test/CMakeFiles/test_mol.dir/build.make test/CMakeFiles/test_mol.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 93%] Building CXX object test/CMakeFiles/test_mol.dir/mol.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_mol.dir/mol.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/mol.cpp Linking CXX executable ../bin/test_mol cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_mol.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_mol.dir/mol.o -o ../bin/test_mol ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 93%] Built target test_mol /usr/bin/make -f test/CMakeFiles/test_phmodel.dir/build.make test/CMakeFiles/test_phmodel.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_phmodel.dir/DependInfo.cmake Scanning dependencies of target test_phmodel /usr/bin/make -f test/CMakeFiles/test_phmodel.dir/build.make test/CMakeFiles/test_phmodel.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 90 [ 94%] Building CXX object test/CMakeFiles/test_phmodel.dir/phmodel.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_phmodel.dir/phmodel.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/phmodel.cpp Linking CXX executable ../bin/test_phmodel cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_phmodel.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_phmodel.dir/phmodel.o -o ../bin/test_phmodel ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 90 [ 94%] Built target test_phmodel /usr/bin/make -f test/CMakeFiles/test_residue.dir/build.make test/CMakeFiles/test_residue.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_residue.dir/DependInfo.cmake Scanning dependencies of target test_residue /usr/bin/make -f test/CMakeFiles/test_residue.dir/build.make test/CMakeFiles/test_residue.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 94%] Building CXX object test/CMakeFiles/test_residue.dir/residue.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_residue.dir/residue.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/residue.cpp Linking CXX executable ../bin/test_residue cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_residue.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_residue.dir/residue.o -o ../bin/test_residue ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 94%] Built target test_residue /usr/bin/make -f test/CMakeFiles/test_ringtest.dir/build.make test/CMakeFiles/test_ringtest.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_ringtest.dir/DependInfo.cmake Scanning dependencies of target test_ringtest /usr/bin/make -f test/CMakeFiles/test_ringtest.dir/build.make test/CMakeFiles/test_ringtest.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 94%] Building CXX object test/CMakeFiles/test_ringtest.dir/ringtest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_ringtest.dir/ringtest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/ringtest.cpp Linking CXX executable ../bin/test_ringtest cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_ringtest.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_ringtest.dir/ringtest.o -o ../bin/test_ringtest ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 94%] Built target test_ringtest /usr/bin/make -f test/CMakeFiles/test_rotor.dir/build.make test/CMakeFiles/test_rotor.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_rotor.dir/DependInfo.cmake Scanning dependencies of target test_rotor /usr/bin/make -f test/CMakeFiles/test_rotor.dir/build.make test/CMakeFiles/test_rotor.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 94%] Building CXX object test/CMakeFiles/test_rotor.dir/rotortest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_rotor.dir/rotortest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/rotortest.cpp Linking CXX executable ../bin/test_rotor cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_rotor.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_rotor.dir/rotortest.o -o ../bin/test_rotor ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 94%] Built target test_rotor /usr/bin/make -f test/CMakeFiles/test_shuffle.dir/build.make test/CMakeFiles/test_shuffle.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_shuffle.dir/DependInfo.cmake Scanning dependencies of target test_shuffle /usr/bin/make -f test/CMakeFiles/test_shuffle.dir/build.make test/CMakeFiles/test_shuffle.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 91 [ 95%] Building CXX object test/CMakeFiles/test_shuffle.dir/shuffletest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_shuffle.dir/shuffletest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/shuffletest.cpp Linking CXX executable ../bin/test_shuffle cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_shuffle.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_shuffle.dir/shuffletest.o -o ../bin/test_shuffle ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 91 [ 95%] Built target test_shuffle /usr/bin/make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_smartsparse.dir/DependInfo.cmake Scanning dependencies of target test_smartsparse /usr/bin/make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 95%] Building CXX object test/CMakeFiles/test_smartsparse.dir/smartsparse.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_smartsparse.dir/smartsparse.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/smartsparse.cpp Linking CXX executable ../bin/test_smartsparse cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_smartsparse.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_smartsparse.dir/smartsparse.o -o ../bin/test_smartsparse ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 95%] Built target test_smartsparse /usr/bin/make -f test/CMakeFiles/test_smartstest.dir/build.make test/CMakeFiles/test_smartstest.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_smartstest.dir/DependInfo.cmake Scanning dependencies of target test_smartstest /usr/bin/make -f test/CMakeFiles/test_smartstest.dir/build.make test/CMakeFiles/test_smartstest.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 95%] Building CXX object test/CMakeFiles/test_smartstest.dir/smartstest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_smartstest.dir/smartstest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/smartstest.cpp Linking CXX executable ../bin/test_smartstest cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_smartstest.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_smartstest.dir/smartstest.o -o ../bin/test_smartstest ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 95%] Built target test_smartstest /usr/bin/make -f test/CMakeFiles/test_smiles.dir/build.make test/CMakeFiles/test_smiles.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_smiles.dir/DependInfo.cmake Scanning dependencies of target test_smiles /usr/bin/make -f test/CMakeFiles/test_smiles.dir/build.make test/CMakeFiles/test_smiles.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 92 [ 96%] Building CXX object test/CMakeFiles/test_smiles.dir/smilestest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_smiles.dir/smilestest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/smilestest.cpp Linking CXX executable ../bin/test_smiles cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_smiles.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_smiles.dir/smilestest.o -o ../bin/test_smiles ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 92 [ 96%] Built target test_smiles /usr/bin/make -f test/CMakeFiles/test_smilesmatch.dir/build.make test/CMakeFiles/test_smilesmatch.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_smilesmatch.dir/DependInfo.cmake Scanning dependencies of target test_smilesmatch /usr/bin/make -f test/CMakeFiles/test_smilesmatch.dir/build.make test/CMakeFiles/test_smilesmatch.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 96%] Building CXX object test/CMakeFiles/test_smilesmatch.dir/smilesmatch.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_smilesmatch.dir/smilesmatch.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/smilesmatch.cpp Linking CXX executable ../bin/test_smilesmatch cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_smilesmatch.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_smilesmatch.dir/smilesmatch.o -o ../bin/test_smilesmatch ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 96%] Built target test_smilesmatch /usr/bin/make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_spectrophore.dir/DependInfo.cmake Scanning dependencies of target test_spectrophore /usr/bin/make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 96%] Building CXX object test/CMakeFiles/test_spectrophore.dir/spectrophoretest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_spectrophore.dir/spectrophoretest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/spectrophoretest.cpp Linking CXX executable ../bin/test_spectrophore cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_spectrophore.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_spectrophore.dir/spectrophoretest.o -o ../bin/test_spectrophore ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 96%] Built target test_spectrophore /usr/bin/make -f test/CMakeFiles/test_squareplanar.dir/build.make test/CMakeFiles/test_squareplanar.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_squareplanar.dir/DependInfo.cmake Scanning dependencies of target test_squareplanar /usr/bin/make -f test/CMakeFiles/test_squareplanar.dir/build.make test/CMakeFiles/test_squareplanar.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 93 [ 97%] Building CXX object test/CMakeFiles/test_squareplanar.dir/squareplanartest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_squareplanar.dir/squareplanartest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/squareplanartest.cpp Linking CXX executable ../bin/test_squareplanar cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_squareplanar.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_squareplanar.dir/squareplanartest.o -o ../bin/test_squareplanar ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 93 [ 97%] Built target test_squareplanar /usr/bin/make -f test/CMakeFiles/test_stereo.dir/build.make test/CMakeFiles/test_stereo.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_stereo.dir/DependInfo.cmake Scanning dependencies of target test_stereo /usr/bin/make -f test/CMakeFiles/test_stereo.dir/build.make test/CMakeFiles/test_stereo.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 97%] Building CXX object test/CMakeFiles/test_stereo.dir/stereotest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_stereo.dir/stereotest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/stereotest.cpp Linking CXX executable ../bin/test_stereo cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_stereo.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_stereo.dir/stereotest.o -o ../bin/test_stereo ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 97%] Built target test_stereo /usr/bin/make -f test/CMakeFiles/test_stereoperception.dir/build.make test/CMakeFiles/test_stereoperception.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_stereoperception.dir/DependInfo.cmake Scanning dependencies of target test_stereoperception /usr/bin/make -f test/CMakeFiles/test_stereoperception.dir/build.make test/CMakeFiles/test_stereoperception.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 97%] Building CXX object test/CMakeFiles/test_stereoperception.dir/stereoperceptiontest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_stereoperception.dir/stereoperceptiontest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/stereoperceptiontest.cpp Linking CXX executable ../bin/test_stereoperception cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_stereoperception.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_stereoperception.dir/stereoperceptiontest.o -o ../bin/test_stereoperception ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 97%] Built target test_stereoperception /usr/bin/make -f test/CMakeFiles/test_tetrahedral.dir/build.make test/CMakeFiles/test_tetrahedral.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_tetrahedral.dir/DependInfo.cmake Scanning dependencies of target test_tetrahedral /usr/bin/make -f test/CMakeFiles/test_tetrahedral.dir/build.make test/CMakeFiles/test_tetrahedral.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 94 [ 98%] Building CXX object test/CMakeFiles/test_tetrahedral.dir/tetrahedraltest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_tetrahedral.dir/tetrahedraltest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/tetrahedraltest.cpp Linking CXX executable ../bin/test_tetrahedral cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_tetrahedral.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_tetrahedral.dir/tetrahedraltest.o -o ../bin/test_tetrahedral ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 94 [ 98%] Built target test_tetrahedral /usr/bin/make -f test/CMakeFiles/test_tetranonplanar.dir/build.make test/CMakeFiles/test_tetranonplanar.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_tetranonplanar.dir/DependInfo.cmake Scanning dependencies of target test_tetranonplanar /usr/bin/make -f test/CMakeFiles/test_tetranonplanar.dir/build.make test/CMakeFiles/test_tetranonplanar.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 98%] Building CXX object test/CMakeFiles/test_tetranonplanar.dir/tetranonplanartest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_tetranonplanar.dir/tetranonplanartest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/tetranonplanartest.cpp Linking CXX executable ../bin/test_tetranonplanar cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_tetranonplanar.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_tetranonplanar.dir/tetranonplanartest.o -o ../bin/test_tetranonplanar ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 98%] Built target test_tetranonplanar /usr/bin/make -f test/CMakeFiles/test_tetraplanar.dir/build.make test/CMakeFiles/test_tetraplanar.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_tetraplanar.dir/DependInfo.cmake Scanning dependencies of target test_tetraplanar /usr/bin/make -f test/CMakeFiles/test_tetraplanar.dir/build.make test/CMakeFiles/test_tetraplanar.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 98%] Building CXX object test/CMakeFiles/test_tetraplanar.dir/tetraplanartest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_tetraplanar.dir/tetraplanartest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/tetraplanartest.cpp Linking CXX executable ../bin/test_tetraplanar cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_tetraplanar.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_tetraplanar.dir/tetraplanartest.o -o ../bin/test_tetraplanar ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 98%] Built target test_tetraplanar /usr/bin/make -f test/CMakeFiles/test_uniqueid.dir/build.make test/CMakeFiles/test_uniqueid.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_uniqueid.dir/DependInfo.cmake Scanning dependencies of target test_uniqueid /usr/bin/make -f test/CMakeFiles/test_uniqueid.dir/build.make test/CMakeFiles/test_uniqueid.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 95 [ 99%] Building CXX object test/CMakeFiles/test_uniqueid.dir/uniqueidtest.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_uniqueid.dir/uniqueidtest.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/uniqueidtest.cpp Linking CXX executable ../bin/test_uniqueid cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_uniqueid.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_uniqueid.dir/uniqueidtest.o -o ../bin/test_uniqueid ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/obj/buildshare/ports/355755/science/openbabel/work/.build/lib /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 95 [ 99%] Built target test_uniqueid /usr/bin/make -f test/CMakeFiles/test_unitcell.dir/build.make test/CMakeFiles/test_unitcell.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/test /obj/buildshare/ports/355755/science/openbabel/work/.build/test/CMakeFiles/test_unitcell.dir/DependInfo.cmake Scanning dependencies of target test_unitcell /usr/bin/make -f test/CMakeFiles/test_unitcell.dir/build.make test/CMakeFiles/test_unitcell.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 99%] Building CXX object test/CMakeFiles/test_unitcell.dir/unitcell.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/obj/buildshare/ports/355755/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_unitcell.dir/unitcell.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/test/unitcell.cpp Linking CXX executable ../bin/test_unitcell cd 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/obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/scripts /obj/buildshare/ports/355755/science/openbabel/work/.build/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake Scanning dependencies of target bindings_python /usr/bin/make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 5 [100%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o cd /obj/buildshare/ports/355755/science/openbabel/work/.build/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dbindings_python_EXPORTS -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -fPIC -I/obj/buildshare/ports/355755/science/openbabel/work/.build/include -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/data -I/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/usr/local/include/python2.7 -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -c /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/scripts/python/openbabel-python.cpp Linking CXX shared module ../lib/_openbabel.so cd /obj/buildshare/ports/355755/science/openbabel/work/.build/scripts && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -O2 -DNDEBUG -shared -Wl,-soname,_openbabel.so -o ../lib/_openbabel.so CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -L/usr/local/lib -lpython2.7 ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/usr/local/lib:/obj/buildshare/ports/355755/science/openbabel/work/.build/lib: /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 5 [100%] Built target bindings_python /usr/local/bin/cmake -E cmake_progress_start /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 0 ===> Staging for openbabel-2.3.2_1 ===> openbabel-2.3.2_1 depends on file: /usr/local/bin/python2.7 - found ===> Generating temporary packing list /usr/local/bin/cmake -H/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 -B/obj/buildshare/ports/355755/science/openbabel/work/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src /obj/buildshare/ports/355755/science/openbabel/work/.build/src/CMakeFiles/openbabel.dir/DependInfo.cmake /usr/bin/make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 [ 20%] Built target openbabel /usr/bin/make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend cd 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Built target MNAformat /usr/bin/make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake /usr/bin/make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 45%] Built target PQSformat /usr/bin/make -f src/formats/CMakeFiles/abinitformat.dir/build.make 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/obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats /obj/buildshare/ports/355755/science/openbabel/work/.build/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake /usr/bin/make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build /usr/local/bin/cmake -E cmake_progress_report /obj/buildshare/ports/355755/science/openbabel/work/.build/CMakeFiles [ 46%] Built target acrformat /usr/bin/make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend cd /obj/buildshare/ports/355755/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /obj/buildshare/ports/355755/science/openbabel/work/openbabel-2.3.2 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"/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mdlformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mol2format.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mol2format.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pdbformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pdbformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/inchiformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/inchiformat.so" to "/usr/local/lib" -- Installing: 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"/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/molreport.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/nulformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/nulformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/povrayformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/povrayformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/reportformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/reportformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/svgformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/svgformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/textformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/textformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/titleformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/titleformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pngformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pngformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/acesformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/acesformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/abinitformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/abinitformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/adfformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/adfformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/castepformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/castepformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/crystal09format.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/crystal09format.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/dmolformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/dmolformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fchkformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fchkformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fhiaimsformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fhiaimsformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gamessformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gamessformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gaussformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gaussformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gausscubeformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gausscubeformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gausszmatformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gausszmatformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gulpformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gulpformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/hinformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/hinformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/jaguarformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/jaguarformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/molproformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/molproformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mopacformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mopacformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/nwchemformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/nwchemformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pwscfformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pwscfformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/qchemformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/qchemformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/turbomoleformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/turbomoleformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/vaspformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/vaspformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xsfformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xsfformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/zindoformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/zindoformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gamessukformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gamessukformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/APIInterface.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/APIInterface.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/CSRformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/CSRformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/PQSformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/PQSformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/MCDLformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/MCDLformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/alchemyformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/alchemyformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/acrformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/acrformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/amberformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/amberformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/balstformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/balstformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/bgfformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/bgfformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/boxformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/boxformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cacaoformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cacaoformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cacheformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cacheformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/carformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/carformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cccformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cccformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chem3dformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chem3dformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemdrawct.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemdrawct.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemtoolformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemtoolformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cifformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cifformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/crkformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/crkformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cssrformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cssrformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/dlpolyformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/dlpolyformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fastsearchformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fastsearchformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fastaformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fastaformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/featformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/featformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fhformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fhformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fingerprintformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fingerprintformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fpsformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/fpsformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/freefracformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/freefracformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/ghemicalformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/ghemicalformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gromos96format.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/gromos96format.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/groformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/groformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/lmpdatformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/lmpdatformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mmcifformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mmcifformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mmodformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mmodformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/moldenformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/moldenformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mpdformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mpdformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mpqcformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/mpqcformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/msiformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/msiformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/msmsformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/msmsformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/opendxformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/opendxformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/outformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/outformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pcmodelformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pcmodelformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pdbqtformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pdbqtformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/posformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/posformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pqrformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pqrformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/shelxformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/shelxformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/thermoformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/thermoformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/tinkerformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/tinkerformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/unichemformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/unichemformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/viewmolformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/viewmolformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xedformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xedformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xyzformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xyzformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/yasaraformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/yasaraformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/rxnformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/rxnformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemdrawcdx.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemdrawcdx.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemkinformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/chemkinformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/rsmiformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/rsmiformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cdxmlformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cdxmlformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cmlformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cmlformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pubchem.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/pubchem.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xmlformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/xmlformat.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cmlreactformat.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/openbabel/2.3.2/cmlreactformat.so" to "/usr/local/lib" -- Installing: 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"/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/obrotate" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/obrms -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/obrms" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/obspectrophore -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/obspectrophore" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/obgrep -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/obgrep" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/roundtrip -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/bin/roundtrip" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/python2.7/site-packages/_openbabel.so -- Set runtime path of "/obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/python2.7/site-packages/_openbabel.so" to "/usr/local/lib" -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/python2.7/site-packages/openbabel.py -- Installing: /obj/buildshare/ports/355755/science/openbabel/work/stage/usr/local/lib/python2.7/site-packages/pybel.py ====> Compressing man pages (compress-man) ===> Installing for openbabel-2.3.2_1 ===> Checking if science/openbabel already installed ===> Registering installation for openbabel-2.3.2_1 Installing openbabel-2.3.2_1... done Make package ===> Building package for openbabel-2.3.2_1 slot1: removed