Building libsbml-5.10.0.txz (origin /buildshare/ports/355755/biology/libsbml) for powerpc-10-0 on XXX
slot2: created
x distfiles/
x distfiles/libSBML-5.10.0-core-src.tar.gz
x packages/
x packages/libxml2-2.9.1_1.txz
x packages/gmake-3.82_1.txz
x packages/pkg-1.2.7_2.txz
x packages/gettext-0.18.3.1_1.txz
x packages/pkgconf-0.9.5.txz
ELF ldconfig path: /lib /usr/lib /usr/lib/compat
Make depends
===>   libsbml-5.10.0 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /buildshare/ports/355755/ports-mgmt/pkg
===>   Installing existing package /packages/pkg-1.2.7_2.txz
Installing pkg-1.2.7_2... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of libsbml-5.10.0
===>   libsbml-5.10.0 depends on shared library: libxml2.so
 - not found
===>    Verifying for libxml2.so in /buildshare/ports/355755/textproc/libxml2
===>   Installing existing package /packages/libxml2-2.9.1_1.txz
Installing libxml2-2.9.1_1... done
===>   Returning to build of libsbml-5.10.0
===>   libsbml-5.10.0 depends on executable: gmake - not found
===>    Verifying install for gmake in /buildshare/ports/355755/devel/gmake
===>   Installing existing package /packages/gmake-3.82_1.txz
Installing gmake-3.82_1...Installing gettext-0.18.3.1_1... done
 done
===>   Returning to build of libsbml-5.10.0
Make install
===>  License LGPL21 accepted by the user
===>   libsbml-5.10.0 depends on file: /usr/local/sbin/pkg - found
===> Fetching all distfiles required by libsbml-5.10.0 for building
===>  Extracting for libsbml-5.10.0
=> SHA256 Checksum OK for libSBML-5.10.0-core-src.tar.gz.
===>  Patching for libsbml-5.10.0
===>  Applying FreeBSD patches for libsbml-5.10.0
/usr/bin/sed -i.bak -e 's#%%PREFIX%%#/obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local#'  /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/Makefile.in
===>   libsbml-5.10.0 depends on executable: gmake - found
===>   libsbml-5.10.0 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so.2.9.1)
===>  Configuring for libsbml-5.10.0
===>   FreeBSD 10 autotools fix applied to /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/acinclude.m4
===>   FreeBSD 10 autotools fix applied to /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/config/libtool.m4
===>   FreeBSD 10 autotools fix applied to /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/aclocal.m4
===>   FreeBSD 10 autotools fix applied to /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/configure
configure: loading site script /buildshare/ports/355755/Templates/config.site
checking build system type... powerpc-portbld-freebsd11.0
checking host system type... powerpc-portbld-freebsd11.0
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking for gcc... cc
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking how to run the C preprocessor... cpp
checking for a BSD-compatible install... /usr/bin/install -c -o root -g wheel
checking whether gmake sets $(MAKE)... yes
checking for autoconf... autoconf
checking for aclocal... aclocal
checking whether -Wno-long-double is supported... no
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for ld used by cc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking whether ln -s works... yes
checking how to recognize dependent libraries... pass_all
checking for ANSI C header files... (cached) yes
checking for sys/types.h... (cached) yes
checking for sys/stat.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
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checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for unistd.h... (cached) yes
checking for dlfcn.h... (cached) yes
checking how to run the C++ preprocessor... c++ -E
checking for g77... no
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checking for lf95... no
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checking for nagfor... no
checking whether we are using the GNU Fortran 77 compiler... no
checking whether  accepts -g... no
checking the maximum length of command line arguments... (cached) 262144
checking command to parse /usr/bin/nm -B output from cc object... ok
checking for objdir... .libs
checking for ar... ar
checking for ranlib... ranlib
checking for strip... strip
checking if cc supports -fno-rtti -fno-exceptions... no
checking for cc option to produce PIC... -fPIC
checking if cc PIC flag -fPIC works... yes
checking if cc static flag -static works... yes
checking if cc supports -c -o file.o... yes
checking whether the cc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd11.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
configure: creating libtool
appending configuration tag "CXX" to libtool
checking for ld used by c++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes
checking for c++ option to produce PIC... -fPIC
checking if c++ PIC flag -fPIC works... yes
checking if c++ static flag -static works... yes
checking if c++ supports -c -o file.o... yes
checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd11.0 ld.so
(cached) (cached) checking how to hardcode library paths into programs... immediate
appending configuration tag "F77" to libtool
checking for bash... no
checking if dolt supports this host... no, falling back to libtool
checking for isnan in -lm... yes
checking for xml2-config... /usr/local/bin/xml2-config
checking for libxml2 - version >= 2.6.16... yes (version 2.9.1)
checking for zlib library... yes
checking for deflate in -lz... (cached) yes
checking for zlib.h... (cached) yes
checking for possibly buggy zlib... no
checking for bzip2 library... yes
checking for BZ2_bzopen in -lbz2... yes
checking bzlib.h usability... yes
checking bzlib.h presence... yes
checking for bzlib.h... yes
checking for ANSI C header files... (cached) yes
checking for errno.h... (cached) yes
checking for math.h... (cached) yes
checking ieeefp.h usability... yes
checking ieeefp.h presence... yes
checking for ieeefp.h... yes
checking whether byte ordering is bigendian... yes
checking for an ANSI C-conforming const... yes
checking for size_t... (cached) yes
configure: creating ./config.status
config.status: creating config/makefile-common-vars.mk
config.status: creating config/lt_link_helper.sh
config.status: creating config/mkoctfile_wrapper.sh
config.status: creating config/chk_swig_version.sh
config.status: creating ./Makefile
config.status: creating libsbml.spec
config.status: creating src/Makefile
config.status: creating src/sbml/common/Makefile
config.status: creating src/sbml/common/libsbml-version.h
config.status: creating src/bindings/Makefile
config.status: creating src/bindings/python/Makefile
config.status: creating src/bindings/python/setup.py
config.status: creating src/bindings/perl/Makefile
config.status: creating src/bindings/perl/Makefile.PL
config.status: creating src/bindings/matlab/Makefile
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config.status: creating src/bindings/octave/Makefile
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config.status: creating src/bindings/java/Makefile
config.status: creating src/bindings/java/Manifest.txt
config.status: creating src/bindings/ruby/Makefile
config.status: creating src/bindings/csharp/Makefile
config.status: creating src/sbml/annotation/Makefile
config.status: creating src/sbml/annotation/test/Makefile
config.status: creating src/sbml/math/Makefile
config.status: creating src/sbml/math/test/Makefile
config.status: creating src/sbml/math-legacy/Makefile
config.status: creating src/sbml/math-legacy/test/Makefile
config.status: creating src/sbml/units/Makefile
config.status: creating src/sbml/units/test/Makefile
config.status: creating src/sbml/Makefile
config.status: creating src/sbml/test/Makefile
config.status: creating src/sbml/util/Makefile
config.status: creating src/sbml/util/test/Makefile
config.status: creating src/sbml/validator/Makefile
config.status: creating src/sbml/validator/constraints/Makefile
config.status: creating src/sbml/validator/test/Makefile
config.status: creating src/sbml/validator/test/test-data/Makefile
config.status: creating src/sbml/validator/test/test-data/sbml-general-consistency-constraints/Makefile
config.status: creating src/sbml/xml/Makefile
config.status: creating src/sbml/xml/test/Makefile
config.status: creating src/sbml/compress/Makefile
config.status: creating src/sbml/extension/Makefile
config.status: creating src/sbml/extension/test/Makefile
config.status: creating src/sbml/extension/RegisterExtensions.h
config.status: creating src/sbml/extension/RegisterExtensions.cxx
config.status: creating src/sbml/conversion/Makefile
config.status: creating src/sbml/conversion/test/Makefile
config.status: creating src/sbml/packages/Makefile
config.status: creating src/sbml/packages/layout/Makefile
config.status: creating src/sbml/packages/layout/common/Makefile
config.status: creating src/sbml/packages/layout/extension/Makefile
config.status: creating src/sbml/packages/layout/sbml/Makefile
config.status: creating src/sbml/packages/layout/sbml/test/Makefile
config.status: creating src/sbml/packages/layout/util/Makefile
config.status: creating src/sbml/packages/layout/validator/Makefile
config.status: creating src/sbml/packages/layout/validator/constraints/Makefile
config.status: creating src/sbml/packages/layout/validator/test/Makefile
config.status: creating src/sbml/packages/layout/validator/test/test-data/Makefile
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config.status: creating macosx/resources/package-intro.txt
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config.status: creating macosx/libsbml-package.pmdoc/01local-contents.xml
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config.status: creating src/sbml/common/libsbml-config-common.h
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----------------------------------------------------------------------
libSBML version 5.10.0
----------------------------------------------------------------------

More information and the latest version are available online at
http://sbml.org/Software/libSBML

Please report problems using the issue tracker at
http://sbml.org/software/libsbml/issue-tracker

To contact the developers directly, email libsbml-team@caltech.edu

Configured on host "slot2.XXX"
  host type                     = freebsd
  host vendor                   = portbld
  host operating system         = freebsd11.0
  host CPU architecture         = powerpc

General build flags:
  CC                            = cc
  CXX                           = c++
  CPPFLAGS                      = -DFREEBSD   
  CFLAGS                        = -O2 -pipe -fno-strict-aliasing
  CFLAGS_ARCH                   = 
  CXXFLAGS                      = -O2 -pipe -fno-strict-aliasing
  CXXFLAGS_ARCH                 = 
  LDFLAGS                       =   
  LDFLAGS_ARCH                  = 
  LIBS                          = -lm  -lz -lbz2

XML parser library configuration:
  XML library                   = libxml2
  CPPFLAGS for XML              = -I/usr/local/include/libxml2 -I/usr/include
  LDFLAGS for XML               = 
  LIBS for XML                  = -L/usr/local/lib -lxml2 -lz -L/usr/lib -lm
  XML2_CONFIG                   = /usr/local/bin/xml2-config

Other libSBML configuration settings:
  Installation $prefix          = /usr/local
  Using zlib with path          = autodetect
  Using bzip2 with path         = autodetect

Support for SBML packages:

Other potentially important settings:
  Compression support is enabled for .zip, .gz and .bz2 files
  Value of $LD_LIBRARY_PATH     = 
----------------------------------------------------------------------

===>  Building for libsbml-5.10.0
gmake[1]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0'
gmake -C src -w -- WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL all
gmake[2]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src'
gmake -C sbml -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj all
gmake[3]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml'
gmake -C common -w -- WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL all
gmake[4]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/common'
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=compile --tag=CXX c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD     -O2 -pipe -fno-strict-aliasing   -MT libsbml-version.lo -MD -MP -MF ".deps/libsbml-version.Po" -c -o libsbml-version.lo libsbml-version.cpp
mkdir .libs
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -O2 -pipe -fno-strict-aliasing -MT libsbml-version.lo -MD -MP -MF .deps/libsbml-version.Po -c libsbml-version.cpp  -fPIC -DPIC -o .libs/libsbml-version.o
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -O2 -pipe -fno-strict-aliasing -MT libsbml-version.lo -MD -MP -MF .deps/libsbml-version.Po -c libsbml-version.cpp -o libsbml-version.o >/dev/null 2>&1
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=compile --tag=CXX c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD     -O2 -pipe -fno-strict-aliasing   -MT operationReturnValues.lo -MD -MP -MF ".deps/operationReturnValues.Po" -c -o operationReturnValues.lo operationReturnValues.cpp
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -O2 -pipe -fno-strict-aliasing -MT operationReturnValues.lo -MD -MP -MF .deps/operationReturnValues.Po -c operationReturnValues.cpp  -fPIC -DPIC -o .libs/operationReturnValues.o
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -O2 -pipe -fno-strict-aliasing -MT operationReturnValues.lo -MD -MP -MF .deps/operationReturnValues.Po -c operationReturnValues.cpp -o operationReturnValues.o >/dev/null 2>&1
gmake[4]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/common'
gmake -C util -w -- WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL all
gmake[4]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/util'
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=compile --tag=CXX c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD    -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing   -MT IdList.lo -MD -MP -MF ".deps/IdList.Po" -c -o IdList.lo IdList.cpp
mkdir .libs
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing -MT IdList.lo -MD -MP -MF .deps/IdList.Po -c IdList.cpp  -fPIC -DPIC -o .libs/IdList.o
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing -MT IdList.lo -MD -MP -MF .deps/IdList.Po -c IdList.cpp -o IdList.o >/dev/null 2>&1
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=compile --tag=CXX c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD    -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing   -MT List.lo -MD -MP -MF ".deps/List.Po" -c -o List.lo List.cpp
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing -MT List.lo -MD -MP -MF .deps/List.Po -c List.cpp  -fPIC -DPIC -o .libs/List.o
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing -MT List.lo -MD -MP -MF .deps/List.Po -c List.cpp -o List.o >/dev/null 2>&1
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=compile --tag=CXX c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD    -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing   -MT IdFilter.lo -MD -MP -MF ".deps/IdFilter.Po" -c -o IdFilter.lo IdFilter.cpp
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing -MT IdFilter.lo -MD -MP -MF .deps/IdFilter.Po -c IdFilter.cpp  -fPIC -DPIC -o .libs/IdFilter.o
 c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_NAME=\"libSBML\" -O2 -pipe -fno-strict-aliasing -MT IdFilter.lo -MD -MP -MF .deps/IdFilter.Po -c IdFilter.cpp -o IdFilter.o >/dev/null 2>&1
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gmake -C constraints -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj all
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/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=compile --tag=CXX c++ -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD    -DPACKAGE_VERSION=\"5.10.0\" -I/usr/local/include/libxml2 -I/usr/include -DUSE_LIBXML -DUSE_ZLIB -DUSE_BZ2 -O2 -pipe -fno-strict-aliasing   -MT UnitDefinition.lo -MD -MP -MF ".deps/UnitDefinition.Po" -c -o UnitDefinition.lo UnitDefinition.cpp
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/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=compile --tag=CC cc -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD    -DPACKAGE_VERSION=\"5.10.0\" -I/usr/local/include/libxml2 -I/usr/include -DUSE_LIBXML -DUSE_ZLIB -DUSE_BZ2 -O2 -pipe -fno-strict-aliasing   -MT UnitKind.lo -MD -MP -MF ".deps/UnitKind.Po" -c -o UnitKind.lo UnitKind.c
 cc -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_VERSION=\"5.10.0\" -I/usr/local/include/libxml2 -I/usr/include -DUSE_LIBXML -DUSE_ZLIB -DUSE_BZ2 -O2 -pipe -fno-strict-aliasing -MT UnitKind.lo -MD -MP -MF .deps/UnitKind.Po -c UnitKind.c  -fPIC -DPIC -o .libs/UnitKind.o
 cc -I. -I/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src -DFREEBSD -DPACKAGE_VERSION=\"5.10.0\" -I/usr/local/include/libxml2 -I/usr/include -DUSE_LIBXML -DUSE_ZLIB -DUSE_BZ2 -O2 -pipe -fno-strict-aliasing -MT UnitKind.lo -MD -MP -MF .deps/UnitKind.Po -c UnitKind.c -o UnitKind.o >/dev/null 2>&1
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=link c++   -version-info `expr 5 \+ 10`:0:10 -inst-prefix-dir "" -shared -rpath /usr/local/lib -o ../libsbml.la AlgebraicRule.lo AssignmentRule.lo Compartment.lo CompartmentType.lo Constraint.lo Delay.lo Event.lo EventAssignment.lo ExpectedAttributes.lo FunctionDefinition.lo InitialAssignment.lo KineticLaw.lo ListOf.lo LocalParameter.lo Model.lo ModifierSpeciesReference.lo Parameter.lo Priority.lo RateRule.lo Reaction.lo Rule.lo SBMLConvert.lo SBMLConstructorException.lo SBMLDocument.lo SBMLError.lo SBMLErrorLog.lo SBMLNamespaces.lo SBMLReader.lo SBMLTransforms.lo SBMLTypeCodes.lo SBMLVisitor.lo SBMLWriter.lo SBO.lo SimpleSpeciesReference.lo SBase.lo Species.lo SpeciesReference.lo SpeciesType.lo StoichiometryMath.lo SyntaxChecker.lo Trigger.lo Unit.lo UnitDefinition.lo UnitKind.lo common/libsbml-version.lo common/operationReturnValues.lo util/Stack.lo util/MetaIdFilter.lo util/util.lo util/IdFilter.lo util/IdentifierTransformer.lo util/ElementFilter.lo util/memory.lo util/StringBuffer.lo util/List.lo util/PrefixTransformer.lo util/IdList.lo xml/XMLErrorLog.lo xml/XMLOutputStream.lo xml/XMLTokenizer.lo xml/XMLParser.lo xml/XMLFileBuffer.lo xml/XMLConstructorException.lo xml/XMLMemoryBuffer.lo xml/XMLNamespaces.lo xml/LibXMLAttributes.lo xml/XMLToken.lo xml/XMLTriple.lo xml/LibXMLTranscode.lo xml/XMLHandler.lo xml/XMLNode.lo xml/LibXMLHandler.lo xml/LibXMLParser.lo xml/LibXMLNamespaces.lo xml/XMLError.lo xml/XMLLogOverride.lo xml/XMLBuffer.lo xml/XMLInputStream.lo xml/XMLAttributes.lo math/ASTFunction.lo math/ASTNumber.lo math/ASTCSymbol.lo math/ASTQualifierNode.lo math/FormulaTokenizer.lo math/ASTNode.lo math/MathML.lo math/ASTSemanticsNode.lo math/ASTCiNumberNode.lo math/L3FormulaFormatter.lo math/ASTCiFunctionNode.lo math/ASTLambdaFunctionNode.lo math/FormulaParser.lo math/ASTTypes.lo math/ASTPiecewiseFunctionNode.lo math/ASTCnRationalNode.lo math/ASTCnRealNode.lo math/ASTCSymbolAvogadroNode.lo math/ASTUnaryFunctionNode.lo math/ASTCSymbolDelayNode.lo math/ASTBinaryFunctionNode.lo math/ASTCnExponentialNode.lo math/L3Parser.lo math/L3ParserSettings.lo math/ASTConstantNumberNode.lo math/ASTCnIntegerNode.lo math/ASTNaryFunctionNode.lo math/ASTCnBase.lo math/ASTCSymbolTimeNode.lo math/FormulaFormatter.lo math/ASTBase.lo math/ASTFunctionBase.lo validator/L2v3CompatibilityValidator.lo validator/SBMLValidator.lo validator/OverdeterminedValidator.lo validator/L2v2CompatibilityValidator.lo validator/L2v1CompatibilityValidator.lo validator/L1CompatibilityValidator.lo validator/L3v1CompatibilityValidator.lo validator/ModelingPracticeValidator.lo validator/UnitConsistencyValidator.lo validator/Validator.lo validator/ConsistencyValidator.lo validator/IdentifierConsistencyValidator.lo validator/L2v4CompatibilityValidator.lo validator/SBOConsistencyValidator.lo validator/SBMLInternalValidator.lo validator/MathMLConsistencyValidator.lo validator/VConstraint.lo validator/InternalConsistencyValidator.lo validator/SBMLExternalValidator.lo validator/constraints/DuplicateTopLevelAnnotation.lo validator/constraints/UniqueIdsInKineticLaw.lo validator/constraints/SpeciesReactionOrRule.lo validator/constraints/LogicalArgsMathCheck.lo validator/constraints/UnitsBase.lo validator/constraints/ArgumentsUnitsCheckWarnings.lo validator/constraints/AssignmentRuleOrdering.lo validator/constraints/L2v3CompatibilityConstraints.lo validator/constraints/InternalConsistencyConstraints.lo validator/constraints/UniqueMetaId.lo validator/constraints/AssignmentCycles.lo validator/constraints/FunctionReferredToExists.lo validator/constraints/FunctionDefinitionVars.lo validator/constraints/UniqueIdBase.lo validator/constraints/UnitConsistencyConstraints.lo validator/constraints/LambdaMathCheck.lo validator/constraints/L2v4CompatibilityConstraints.lo validator/constraints/L3v1CompatibilityConstraints.lo validator/constraints/CompartmentOutsideCycles.lo validator/constraints/UniqueSpeciesTypesInCompartment.lo validator/constraints/ModelingPracticeConstraints.lo validator/constraints/UniqueVarsInRules.lo validator/constraints/NumberArgsMathCheck.lo validator/constraints/ExponentUnitsCheck.lo validator/constraints/EqualityArgsMathCheck.lo validator/constraints/KineticLawVars.lo validator/constraints/LocalParameterMathCheck.lo validator/constraints/IdBase.lo validator/constraints/SBOConsistencyConstraints.lo validator/constraints/UniqueVarsInEventsAndRules.lo validator/constraints/StoichiometryMathVars.lo validator/constraints/PiecewiseValueMathCheck.lo validator/constraints/OverDeterminedCheck.lo validator/constraints/PowerUnitsCheck.lo validator/constraints/CiElementMathCheck.lo validator/constraints/MathMLConsistencyConstraints.lo validator/constraints/NumericReturnMathCheck.lo validator/constraints/KineticLawUnitsCheck.lo validator/constraints/ValidCnUnitsValue.lo validator/constraints/UniqueSymbolsInInitialAssignments.lo validator/constraints/UniqueVarsInInitialAssignmentsAndRules.lo validator/constraints/NumericArgsMathCheck.lo validator/constraints/L2v1CompatibilityConstraints.lo validator/constraints/ArgumentsUnitsCheck.lo validator/constraints/L2v2CompatibilityConstraints.lo validator/constraints/UniqueVarsInEventAssignments.lo validator/constraints/FunctionApplyMathCheck.lo validator/constraints/UniqueIdsForUnitDefinitions.lo validator/constraints/LocalParameterShadowsIdInModel.lo validator/constraints/FunctionNoArgsMathCheck.lo validator/constraints/IdentifierConsistencyConstraints.lo validator/constraints/ConsistencyConstraints.lo validator/constraints/L1CompatibilityConstraints.lo validator/constraints/OverdeterminedConstraints.lo validator/constraints/UniqueIdsInModel.lo validator/constraints/MathMLBase.lo validator/constraints/PieceBooleanMathCheck.lo units/FormulaUnitsData.lo units/UnitKindList.lo units/UnitFormulaFormatter.lo annotation/ModelHistory.lo annotation/RDFAnnotationParser.lo annotation/ModelCreator.lo annotation/CVTerm.lo annotation/Date.lo compress/CompressCommon.lo compress/InputDecompressor.lo compress/zip.lo compress/zfstream.lo compress/iowin32.lo compress/OutputCompressor.lo compress/bzfstream.lo compress/ioapi.lo compress/unzip.lo compress/zipfstream.lo extension/SBMLExtensionRegistry.lo extension/SBaseExtensionPoint.lo extension/SBMLExtension.lo extension/ISBMLExtensionNamespaces.lo extension/SBasePlugin.lo extension/SBMLDocumentPlugin.lo extension/ASTBasePlugin.lo extension/SBMLDocumentPluginNotRequired.lo extension/SBMLExtensionException.lo extension/SBMLExtensionNamespaces.lo extension/SBasePluginCreatorBase.lo conversion/SBMLStripPackageConverter.lo conversion/SBMLUnitsConverter.lo conversion/RegisterConverters.lo conversion/SBMLConverter.lo conversion/SBMLLevelVersionConverter.lo conversion/SBMLInitialAssignmentConverter.lo conversion/SBMLConverterRegistry.lo conversion/SBMLReactionConverter.lo conversion/SBMLFunctionDefinitionConverter.lo conversion/SBMLInferUnitsConverter.lo conversion/SBMLIdConverter.lo conversion/SBMLLocalParameterConverter.lo conversion/ConversionOption.lo conversion/SBMLRuleConverter.lo conversion/ConversionProperties.lo -L/usr/local/lib -lxml2 -lz -L/usr/lib -lm -lm   -lz -lbz2
mkdir ../.libs
c++ -shared -nostdlib /usr/lib/crti.o /usr/lib/crtbeginS.o  .libs/AlgebraicRule.o .libs/AssignmentRule.o .libs/Compartment.o .libs/CompartmentType.o .libs/Constraint.o .libs/Delay.o .libs/Event.o .libs/EventAssignment.o .libs/ExpectedAttributes.o .libs/FunctionDefinition.o .libs/InitialAssignment.o .libs/KineticLaw.o .libs/ListOf.o .libs/LocalParameter.o .libs/Model.o .libs/ModifierSpeciesReference.o .libs/Parameter.o .libs/Priority.o .libs/RateRule.o .libs/Reaction.o .libs/Rule.o .libs/SBMLConvert.o .libs/SBMLConstructorException.o .libs/SBMLDocument.o .libs/SBMLError.o .libs/SBMLErrorLog.o .libs/SBMLNamespaces.o .libs/SBMLReader.o .libs/SBMLTransforms.o .libs/SBMLTypeCodes.o .libs/SBMLVisitor.o .libs/SBMLWriter.o .libs/SBO.o .libs/SimpleSpeciesReference.o .libs/SBase.o .libs/Species.o .libs/SpeciesReference.o .libs/SpeciesType.o .libs/StoichiometryMath.o .libs/SyntaxChecker.o .libs/Trigger.o .libs/Unit.o .libs/UnitDefinition.o .libs/UnitKind.o common/.libs/libsbml-version.o common/.libs/operationReturnValues.o util/.libs/Stack.o util/.libs/MetaIdFilter.o util/.libs/util.o util/.libs/IdFilter.o util/.libs/IdentifierTransformer.o util/.libs/ElementFilter.o util/.libs/memory.o util/.libs/StringBuffer.o util/.libs/List.o util/.libs/PrefixTransformer.o util/.libs/IdList.o xml/.libs/XMLErrorLog.o xml/.libs/XMLOutputStream.o xml/.libs/XMLTokenizer.o xml/.libs/XMLParser.o xml/.libs/XMLFileBuffer.o xml/.libs/XMLConstructorException.o xml/.libs/XMLMemoryBuffer.o xml/.libs/XMLNamespaces.o xml/.libs/LibXMLAttributes.o xml/.libs/XMLToken.o xml/.libs/XMLTriple.o xml/.libs/LibXMLTranscode.o xml/.libs/XMLHandler.o xml/.libs/XMLNode.o xml/.libs/LibXMLHandler.o xml/.libs/LibXMLParser.o xml/.libs/LibXMLNamespaces.o xml/.libs/XMLError.o xml/.libs/XMLLogOverride.o xml/.libs/XMLBuffer.o xml/.libs/XMLInputStream.o xml/.libs/XMLAttributes.o math/.libs/ASTFunction.o math/.libs/ASTNumber.o math/.libs/ASTCSymbol.o math/.libs/ASTQualifierNode.o math/.libs/FormulaTokenizer.o math/.libs/ASTNode.o math/.libs/MathML.o math/.libs/ASTSemanticsNode.o math/.libs/ASTCiNumberNode.o math/.libs/L3FormulaFormatter.o math/.libs/ASTCiFunctionNode.o math/.libs/ASTLambdaFunctionNode.o math/.libs/FormulaParser.o math/.libs/ASTTypes.o math/.libs/ASTPiecewiseFunctionNode.o math/.libs/ASTCnRationalNode.o math/.libs/ASTCnRealNode.o math/.libs/ASTCSymbolAvogadroNode.o math/.libs/ASTUnaryFunctionNode.o math/.libs/ASTCSymbolDelayNode.o math/.libs/ASTBinaryFunctionNode.o math/.libs/ASTCnExponentialNode.o math/.libs/L3Parser.o math/.libs/L3ParserSettings.o math/.libs/ASTConstantNumberNode.o math/.libs/ASTCnIntegerNode.o math/.libs/ASTNaryFunctionNode.o math/.libs/ASTCnBase.o math/.libs/ASTCSymbolTimeNode.o math/.libs/FormulaFormatter.o math/.libs/ASTBase.o math/.libs/ASTFunctionBase.o validator/.libs/L2v3CompatibilityValidator.o validator/.libs/SBMLValidator.o validator/.libs/OverdeterminedValidator.o validator/.libs/L2v2CompatibilityValidator.o validator/.libs/L2v1CompatibilityValidator.o validator/.libs/L1CompatibilityValidator.o validator/.libs/L3v1CompatibilityValidator.o validator/.libs/ModelingPracticeValidator.o validator/.libs/UnitConsistencyValidator.o validator/.libs/Validator.o validator/.libs/ConsistencyValidator.o validator/.libs/IdentifierConsistencyValidator.o validator/.libs/L2v4CompatibilityValidator.o validator/.libs/SBOConsistencyValidator.o validator/.libs/SBMLInternalValidator.o validator/.libs/MathMLConsistencyValidator.o validator/.libs/VConstraint.o validator/.libs/InternalConsistencyValidator.o validator/.libs/SBMLExternalValidator.o validator/constraints/.libs/DuplicateTopLevelAnnotation.o validator/constraints/.libs/UniqueIdsInKineticLaw.o validator/constraints/.libs/SpeciesReactionOrRule.o validator/constraints/.libs/LogicalArgsMathCheck.o validator/constraints/.libs/UnitsBase.o validator/constraints/.libs/ArgumentsUnitsCheckWarnings.o validator/constraints/.libs/AssignmentRuleOrdering.o validator/constraints/.libs/L2v3CompatibilityConstraints.o validator/constraints/.libs/InternalConsistencyConstraints.o validator/constraints/.libs/UniqueMetaId.o validator/constraints/.libs/AssignmentCycles.o validator/constraints/.libs/FunctionReferredToExists.o validator/constraints/.libs/FunctionDefinitionVars.o validator/constraints/.libs/UniqueIdBase.o validator/constraints/.libs/UnitConsistencyConstraints.o validator/constraints/.libs/LambdaMathCheck.o validator/constraints/.libs/L2v4CompatibilityConstraints.o validator/constraints/.libs/L3v1CompatibilityConstraints.o validator/constraints/.libs/CompartmentOutsideCycles.o validator/constraints/.libs/UniqueSpeciesTypesInCompartment.o validator/constraints/.libs/ModelingPracticeConstraints.o validator/constraints/.libs/UniqueVarsInRules.o validator/constraints/.libs/NumberArgsMathCheck.o validator/constraints/.libs/ExponentUnitsCheck.o validator/constraints/.libs/EqualityArgsMathCheck.o validator/constraints/.libs/KineticLawVars.o validator/constraints/.libs/LocalParameterMathCheck.o validator/constraints/.libs/IdBase.o validator/constraints/.libs/SBOConsistencyConstraints.o validator/constraints/.libs/UniqueVarsInEventsAndRules.o validator/constraints/.libs/StoichiometryMathVars.o validator/constraints/.libs/PiecewiseValueMathCheck.o validator/constraints/.libs/OverDeterminedCheck.o validator/constraints/.libs/PowerUnitsCheck.o validator/constraints/.libs/CiElementMathCheck.o validator/constraints/.libs/MathMLConsistencyConstraints.o validator/constraints/.libs/NumericReturnMathCheck.o validator/constraints/.libs/KineticLawUnitsCheck.o validator/constraints/.libs/ValidCnUnitsValue.o validator/constraints/.libs/UniqueSymbolsInInitialAssignments.o validator/constraints/.libs/UniqueVarsInInitialAssignmentsAndRules.o validator/constraints/.libs/NumericArgsMathCheck.o validator/constraints/.libs/L2v1CompatibilityConstraints.o validator/constraints/.libs/ArgumentsUnitsCheck.o validator/constraints/.libs/L2v2CompatibilityConstraints.o validator/constraints/.libs/UniqueVarsInEventAssignments.o validator/constraints/.libs/FunctionApplyMathCheck.o validator/constraints/.libs/UniqueIdsForUnitDefinitions.o validator/constraints/.libs/LocalParameterShadowsIdInModel.o validator/constraints/.libs/FunctionNoArgsMathCheck.o validator/constraints/.libs/IdentifierConsistencyConstraints.o validator/constraints/.libs/ConsistencyConstraints.o validator/constraints/.libs/L1CompatibilityConstraints.o validator/constraints/.libs/OverdeterminedConstraints.o validator/constraints/.libs/UniqueIdsInModel.o validator/constraints/.libs/MathMLBase.o validator/constraints/.libs/PieceBooleanMathCheck.o units/.libs/FormulaUnitsData.o units/.libs/UnitKindList.o units/.libs/UnitFormulaFormatter.o annotation/.libs/ModelHistory.o annotation/.libs/RDFAnnotationParser.o annotation/.libs/ModelCreator.o annotation/.libs/CVTerm.o annotation/.libs/Date.o compress/.libs/CompressCommon.o compress/.libs/InputDecompressor.o compress/.libs/zip.o compress/.libs/zfstream.o compress/.libs/iowin32.o compress/.libs/OutputCompressor.o compress/.libs/bzfstream.o compress/.libs/ioapi.o compress/.libs/unzip.o compress/.libs/zipfstream.o extension/.libs/SBMLExtensionRegistry.o extension/.libs/SBaseExtensionPoint.o extension/.libs/SBMLExtension.o extension/.libs/ISBMLExtensionNamespaces.o extension/.libs/SBasePlugin.o extension/.libs/SBMLDocumentPlugin.o extension/.libs/ASTBasePlugin.o extension/.libs/SBMLDocumentPluginNotRequired.o extension/.libs/SBMLExtensionException.o extension/.libs/SBMLExtensionNamespaces.o extension/.libs/SBasePluginCreatorBase.o conversion/.libs/SBMLStripPackageConverter.o conversion/.libs/SBMLUnitsConverter.o conversion/.libs/RegisterConverters.o conversion/.libs/SBMLConverter.o conversion/.libs/SBMLLevelVersionConverter.o conversion/.libs/SBMLInitialAssignmentConverter.o conversion/.libs/SBMLConverterRegistry.o conversion/.libs/SBMLReactionConverter.o conversion/.libs/SBMLFunctionDefinitionConverter.o conversion/.libs/SBMLInferUnitsConverter.o conversion/.libs/SBMLIdConverter.o conversion/.libs/SBMLLocalParameterConverter.o conversion/.libs/ConversionOption.o conversion/.libs/SBMLRuleConverter.o conversion/.libs/ConversionProperties.o  -Wl,--rpath -Wl,/usr/local/lib -Wl,--rpath -Wl,/usr/local/lib -L/usr/local/lib /usr/local/lib/libxml2.so -L/usr/lib -lz -lbz2 -lstdc++ -lm -lc -lgcc_s /usr/lib/crtsavres.o /usr/lib/crtendS.o /usr/lib/crtn.o  -Wl,-soname -Wl,libsbml.so.5 -o ../.libs/libsbml.so.5.10.0
(cd ../.libs && rm -f libsbml.so.5 && ln -s libsbml.so.5.10.0 libsbml.so.5)
(cd ../.libs && rm -f libsbml.so && ln -s libsbml.so.5.10.0 libsbml.so)
ar cru ../.libs/libsbml.a  AlgebraicRule.o AssignmentRule.o Compartment.o CompartmentType.o Constraint.o Delay.o Event.o EventAssignment.o ExpectedAttributes.o FunctionDefinition.o InitialAssignment.o KineticLaw.o ListOf.o LocalParameter.o Model.o ModifierSpeciesReference.o Parameter.o Priority.o RateRule.o Reaction.o Rule.o SBMLConvert.o SBMLConstructorException.o SBMLDocument.o SBMLError.o SBMLErrorLog.o SBMLNamespaces.o SBMLReader.o SBMLTransforms.o SBMLTypeCodes.o SBMLVisitor.o SBMLWriter.o SBO.o SimpleSpeciesReference.o SBase.o Species.o SpeciesReference.o SpeciesType.o StoichiometryMath.o SyntaxChecker.o Trigger.o Unit.o UnitDefinition.o UnitKind.o common/libsbml-version.o common/operationReturnValues.o util/Stack.o util/MetaIdFilter.o util/util.o util/IdFilter.o util/IdentifierTransformer.o util/ElementFilter.o util/memory.o util/StringBuffer.o util/List.o util/PrefixTransformer.o util/IdList.o xml/XMLErrorLog.o xml/XMLOutputStream.o xml/XMLTokenizer.o xml/XMLParser.o xml/XMLFileBuffer.o xml/XMLConstructorException.o xml/XMLMemoryBuffer.o xml/XMLNamespaces.o xml/LibXMLAttributes.o xml/XMLToken.o xml/XMLTriple.o xml/LibXMLTranscode.o xml/XMLHandler.o xml/XMLNode.o xml/LibXMLHandler.o xml/LibXMLParser.o xml/LibXMLNamespaces.o xml/XMLError.o xml/XMLLogOverride.o xml/XMLBuffer.o xml/XMLInputStream.o xml/XMLAttributes.o math/ASTFunction.o math/ASTNumber.o math/ASTCSymbol.o math/ASTQualifierNode.o math/FormulaTokenizer.o math/ASTNode.o math/MathML.o math/ASTSemanticsNode.o math/ASTCiNumberNode.o math/L3FormulaFormatter.o math/ASTCiFunctionNode.o math/ASTLambdaFunctionNode.o math/FormulaParser.o math/ASTTypes.o math/ASTPiecewiseFunctionNode.o math/ASTCnRationalNode.o math/ASTCnRealNode.o math/ASTCSymbolAvogadroNode.o math/ASTUnaryFunctionNode.o math/ASTCSymbolDelayNode.o math/ASTBinaryFunctionNode.o math/ASTCnExponentialNode.o math/L3Parser.o math/L3ParserSettings.o math/ASTConstantNumberNode.o math/ASTCnIntegerNode.o math/ASTNaryFunctionNode.o math/ASTCnBase.o math/ASTCSymbolTimeNode.o math/FormulaFormatter.o math/ASTBase.o math/ASTFunctionBase.o validator/L2v3CompatibilityValidator.o validator/SBMLValidator.o validator/OverdeterminedValidator.o validator/L2v2CompatibilityValidator.o validator/L2v1CompatibilityValidator.o validator/L1CompatibilityValidator.o validator/L3v1CompatibilityValidator.o validator/ModelingPracticeValidator.o validator/UnitConsistencyValidator.o validator/Validator.o validator/ConsistencyValidator.o validator/IdentifierConsistencyValidator.o validator/L2v4CompatibilityValidator.o validator/SBOConsistencyValidator.o validator/SBMLInternalValidator.o validator/MathMLConsistencyValidator.o validator/VConstraint.o validator/InternalConsistencyValidator.o validator/SBMLExternalValidator.o validator/constraints/DuplicateTopLevelAnnotation.o validator/constraints/UniqueIdsInKineticLaw.o validator/constraints/SpeciesReactionOrRule.o validator/constraints/LogicalArgsMathCheck.o validator/constraints/UnitsBase.o validator/constraints/ArgumentsUnitsCheckWarnings.o validator/constraints/AssignmentRuleOrdering.o validator/constraints/L2v3CompatibilityConstraints.o validator/constraints/InternalConsistencyConstraints.o validator/constraints/UniqueMetaId.o validator/constraints/AssignmentCycles.o validator/constraints/FunctionReferredToExists.o validator/constraints/FunctionDefinitionVars.o validator/constraints/UniqueIdBase.o validator/constraints/UnitConsistencyConstraints.o validator/constraints/LambdaMathCheck.o validator/constraints/L2v4CompatibilityConstraints.o validator/constraints/L3v1CompatibilityConstraints.o validator/constraints/CompartmentOutsideCycles.o validator/constraints/UniqueSpeciesTypesInCompartment.o validator/constraints/ModelingPracticeConstraints.o validator/constraints/UniqueVarsInRules.o validator/constraints/NumberArgsMathCheck.o validator/constraints/ExponentUnitsCheck.o validator/constraints/EqualityArgsMathCheck.o validator/constraints/KineticLawVars.o validator/constraints/LocalParameterMathCheck.o validator/constraints/IdBase.o validator/constraints/SBOConsistencyConstraints.o validator/constraints/UniqueVarsInEventsAndRules.o validator/constraints/StoichiometryMathVars.o validator/constraints/PiecewiseValueMathCheck.o validator/constraints/OverDeterminedCheck.o validator/constraints/PowerUnitsCheck.o validator/constraints/CiElementMathCheck.o validator/constraints/MathMLConsistencyConstraints.o validator/constraints/NumericReturnMathCheck.o validator/constraints/KineticLawUnitsCheck.o validator/constraints/ValidCnUnitsValue.o validator/constraints/UniqueSymbolsInInitialAssignments.o validator/constraints/UniqueVarsInInitialAssignmentsAndRules.o validator/constraints/NumericArgsMathCheck.o validator/constraints/L2v1CompatibilityConstraints.o validator/constraints/ArgumentsUnitsCheck.o validator/constraints/L2v2CompatibilityConstraints.o validator/constraints/UniqueVarsInEventAssignments.o validator/constraints/FunctionApplyMathCheck.o validator/constraints/UniqueIdsForUnitDefinitions.o validator/constraints/LocalParameterShadowsIdInModel.o validator/constraints/FunctionNoArgsMathCheck.o validator/constraints/IdentifierConsistencyConstraints.o validator/constraints/ConsistencyConstraints.o validator/constraints/L1CompatibilityConstraints.o validator/constraints/OverdeterminedConstraints.o validator/constraints/UniqueIdsInModel.o validator/constraints/MathMLBase.o validator/constraints/PieceBooleanMathCheck.o units/FormulaUnitsData.o units/UnitKindList.o units/UnitFormulaFormatter.o annotation/ModelHistory.o annotation/RDFAnnotationParser.o annotation/ModelCreator.o annotation/CVTerm.o annotation/Date.o compress/CompressCommon.o compress/InputDecompressor.o compress/zip.o compress/zfstream.o compress/iowin32.o compress/OutputCompressor.o compress/bzfstream.o compress/ioapi.o compress/unzip.o compress/zipfstream.o extension/SBMLExtensionRegistry.o extension/SBaseExtensionPoint.o extension/SBMLExtension.o extension/ISBMLExtensionNamespaces.o extension/SBasePlugin.o extension/SBMLDocumentPlugin.o extension/ASTBasePlugin.o extension/SBMLDocumentPluginNotRequired.o extension/SBMLExtensionException.o extension/SBMLExtensionNamespaces.o extension/SBasePluginCreatorBase.o conversion/SBMLStripPackageConverter.o conversion/SBMLUnitsConverter.o conversion/RegisterConverters.o conversion/SBMLConverter.o conversion/SBMLLevelVersionConverter.o conversion/SBMLInitialAssignmentConverter.o conversion/SBMLConverterRegistry.o conversion/SBMLReactionConverter.o conversion/SBMLFunctionDefinitionConverter.o conversion/SBMLInferUnitsConverter.o conversion/SBMLIdConverter.o conversion/SBMLLocalParameterConverter.o conversion/ConversionOption.o conversion/SBMLRuleConverter.o conversion/ConversionProperties.o
ranlib ../.libs/libsbml.a
creating ../libsbml.la
(cd ../.libs && rm -f libsbml.la && ln -s ../libsbml.la libsbml.la)
gmake[4]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml'
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gmake -C bindings -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj all
gmake[3]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/bindings'
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gmake -C docs -w -- WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL all
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gmake[2]: Nothing to be done for `all'.
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gmake -C macosx -w -- WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL all
gmake[2]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/macosx'
gmake[2]: Nothing to be done for `all'.
gmake[2]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/macosx'
gmake[1]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0'
===>  Staging for libsbml-5.10.0
===>   Generating temporary packing list
gmake[1]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0'
gmake -C src -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
gmake[2]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src'
gmake -C sbml -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage install
gmake[3]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml'
gmake -C common -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
gmake[4]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/common'
mkdir -p -- /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/common.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/extern.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/libsbml-config.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/libsbml-config-common.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/libsbml-namespace.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/libsbml-version.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/operationReturnValues.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/common/sbmlfwd.h
gmake[4]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/common'
gmake -C util -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
gmake[4]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/util'
mkdir -p -- /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/IdList.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/List.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/IdFilter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/MetaIdFilter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/memory.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/Stack.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/StringBuffer.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/ElementFilter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/IdentifierTransformer.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/PrefixTransformer.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/util/util.h
gmake[4]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/util'
gmake -C compress -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
gmake[4]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/compress'
mkdir -p -- /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/CompressCommon.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/InputDecompressor.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/OutputCompressor.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/crypt.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/zip.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/unzip.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/ioapi.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/iowin32.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/zfstream.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/compress/zipfstream.h
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gmake -C annotation -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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gmake -C math -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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gmake -C math-legacy -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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gmake -C units -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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gmake -C xml -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/xml/XMLAttributes.h
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gmake -C validator -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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gmake -C constraints -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage install
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Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/validator/constraints/MathMLBase.h
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gmake -C test -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage install
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gmake -C test-data -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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gmake -C sbml-general-consistency-constraints -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage install
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gmake -C extension -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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mkdir -p -- /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/extension
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/extension/ASTBasePlugin.h
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Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/extension/SBMLExtension.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/extension/SBMLExtensionNamespaces.h
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Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/extension/SBMLExtensionRegistry.h
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gmake -C packages -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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gmake -C conversion -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
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Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/ConversionOption.h
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Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLIdConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLInferUnitsConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLInitialAssignmentConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLLevelVersionConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLLocalParameterConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLReactionConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLRuleConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLStripPackageConverter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/conversion/SBMLUnitsConverter.h
gmake[4]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/conversion'
gmake -C test -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
gmake[4]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/test'
gmake[4]: Nothing to be done for `install'.
gmake[4]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml/test'
gmake -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL default
gmake[4]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml'
gmake[4]: Nothing to be done for `default'.
gmake[4]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml'
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/config/mkinstalldirs /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib
/bin/sh /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/libtool --mode=install /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/config/install-sh -c ../libsbml.la /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib
/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/config/install-sh -c ../.libs/libsbml.so.5.10.0 /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib/libsbml.so.5.10.0
(cd /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib && { ln -s -f libsbml.so.5.10.0 libsbml.so.5 || { rm -f libsbml.so.5 && ln -s libsbml.so.5.10.0 libsbml.so.5; }; })
(cd /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib && { ln -s -f libsbml.so.5.10.0 libsbml.so || { rm -f libsbml.so && ln -s libsbml.so.5.10.0 libsbml.so; }; })
/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/config/install-sh -c ../.libs/libsbml.lai /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib/libsbml.la
/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/config/install-sh -c ../.libs/libsbml.a /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib/libsbml.a
chmod 644 /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib/libsbml.a
ranlib /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib/libsbml.a
libtool: install: warning: remember to run `libtool --finish /usr/local/lib'
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/AlgebraicRule.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/AssignmentRule.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Compartment.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/CompartmentType.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Constraint.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Delay.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Event.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/EventAssignment.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/ExpectedAttributes.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/FunctionDefinition.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/InitialAssignment.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/KineticLaw.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/ListOf.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/LocalParameter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Model.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/ModifierSpeciesReference.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Parameter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Priority.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/RateRule.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Reaction.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Rule.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLConstructorException.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLDocument.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLError.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLErrorLog.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLErrorTable.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLNamespaces.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLReader.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLTransforms.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLTypeCodes.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLTypes.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLVisitor.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBMLWriter.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBO.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SimpleSpeciesReference.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SBase.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Species.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SpeciesReference.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SpeciesType.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/StoichiometryMath.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/SyntaxChecker.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Trigger.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/Unit.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/UnitDefinition.h
Copying /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/include/sbml/UnitKind.h
gmake[3]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/sbml'
gmake -C bindings -w -- .MAKE.LEVEL.ENV=MAKELEVEL ARCH=powerpc BATCH=true DISABLE_MAKE_JOBS=true DISTDIR=/distfiles OPSYS=FreeBSD OSREL=11.0 OSVERSION=1000510 PACKAGES=/packages PACKAGE_BUILDING=1 PKGREPOSITORY=/packages PORTSDIR=/buildshare/ports/355755 SYSTEMVERSION= USE_PACKAGE_DEPENDS=true WRKDIRPREFIX=/obj DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage install
gmake[3]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/bindings'
gmake[3]: Nothing to be done for `install'.
gmake[3]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src/bindings'
gmake[2]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/src'
gmake -C docs -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
gmake[2]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/docs'
gmake[2]: Nothing to be done for `install'.
gmake[2]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/docs'
gmake -C macosx -w -- DESTDIR=/obj/buildshare/ports/355755/biology/libsbml/work/stage WRKDIRPREFIX=/obj USE_PACKAGE_DEPENDS=true SYSTEMVERSION= PORTSDIR=/buildshare/ports/355755 PKGREPOSITORY=/packages PACKAGE_BUILDING=1 PACKAGES=/packages OSVERSION=1000510 OSREL=11.0 OPSYS=FreeBSD DISTDIR=/distfiles DISABLE_MAKE_JOBS=true BATCH=true ARCH=powerpc .MAKE.LEVEL.ENV=MAKELEVEL install
gmake[2]: Entering directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/macosx'
gmake[2]: Nothing to be done for `install'.
gmake[2]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/macosx'
Makefile:654: 
  The installation of libSBML is finished.  On certain platforms
  (such as Linux), you will also need to do one of the following:
  1) run 'ldconfig' (see the man page if this is unfamiliar)
  2) set the LD_LIBRARY_PATH (or equivalent) environment variable
  to contain the path "/obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/lib" so that programs can
  find the libSBML library at run-time.

/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/config/install-sh -c libsbml.pc -m 0644 "/obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/libdata/pkgconfig/libsbml.pc"
gmake[1]: Leaving directory `/obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0'
/bin/mkdir -p /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/share/examples/libsbml
cd /obj/buildshare/ports/355755/biology/libsbml/work/libsbml-5.10.0/examples  && /usr/bin/find . -type f -name "._Makefile.in" -exec /bin/rm -f {} \;  && /usr/bin/find . -type d -exec /bin/mkdir -p /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/share/examples/libsbml/\{} \;  && /usr/bin/find . -type f -exec install  -o root -g wheel -m 444 \{} /obj/buildshare/ports/355755/biology/libsbml/work/stage/usr/local/share/examples/libsbml/\{} \;
====> Compressing man pages (compress-man)
===>  Installing for libsbml-5.10.0
===>  Checking if biology/libsbml already installed
===>   Registering installation for libsbml-5.10.0
Installing libsbml-5.10.0... done
Make package
===>  Building package for libsbml-5.10.0
slot2: removed