Building embassy-6.2.0_2.txz (origin /buildshare/ports/355755/biology/embassy) for powerpc-10-0 on XXX
slot2: created
x distfiles/
x distfiles/emboss/
x distfiles/emboss/EMNU-1.05.tar.gz
x distfiles/emboss/VIENNA-1.7.2.tar.gz
x distfiles/emboss/DOMALIGN-0.1.0.tar.gz
x distfiles/emboss/SIGNATURE-0.1.0.tar.gz
x distfiles/emboss/MEMENEW-4.0.0.tar.gz
x distfiles/emboss/PHYLIPNEW-3.69.tar.gz
x distfiles/emboss/IPRSCAN-4.3.1.tar.gz
x distfiles/emboss/MYEMBOSS-6.2.0.tar.gz
x distfiles/emboss/STRUCTURE-0.1.0.tar.gz
x distfiles/emboss/ESIM4-1.0.0.tar.gz
x distfiles/emboss/DOMAINATRIX-0.1.0.tar.gz
x distfiles/emboss/DOMSEARCH-0.1.0.tar.gz
x distfiles/emboss/MIRA-2.8.2.tar.gz
x distfiles/emboss/TOPO-2.0.0.tar.gz
x distfiles/emboss/HMMER-2.3.2.tar.gz
x distfiles/emboss/MSE-3.0.0.tar.gz
x distfiles/emboss/CBSTOOLS-1.0.0.tar.gz
x packages/
x packages/renderproto-0.11.1.txz
x packages/open-motif-2.3.4_1.txz
x packages/libdrm-2.4.17_1.txz
x packages/xproto-7.0.25.txz
x packages/bigreqsproto-1.1.2.txz
x packages/inputproto-2.3.txz
x packages/libgd-2.1.0_3,1.txz
x packages/libXmu-1.1.2_2,1.txz
x packages/libgpg-error-1.13.txz
x packages/pkg-1.2.7_2.txz
x packages/libGLU-9.0.0.txz
x packages/autoconf-2.69.txz
x packages/xcb-proto-1.10_1.txz
x packages/freeglut-2.8.1_2.txz
x packages/libXrender-0.9.8_2.txz
x packages/libpthread-stubs-0.3_4.txz
x packages/xbitmaps-1.1.1.txz
x packages/fixesproto-5.0.txz
x packages/xorg-macros-1.19.0.txz
x packages/libtool-2.4.2_3.txz
x packages/xtrans-1.3.4_1.txz
x packages/kbproto-1.0.6.txz
x packages/makedepend-1.0.5,1.txz
x packages/py27-setuptools27-2.0.1.txz
x packages/cmake-modules-2.8.12.1_1.txz
x packages/jpeg-8_5.txz
x packages/libxcb-1.10_2.txz
x packages/libX11-1.6.2_2,1.txz
x packages/help2man-1.43.3_1.txz
x packages/pciids-20140526.txz
x packages/libpciaccess-0.13.2_2.txz
x packages/libXext-1.3.2_2,1.txz
x packages/randrproto-1.4.0.txz
x packages/libXau-1.0.8_2.txz
x packages/xf86bigfontproto-1.2.0.txz
x packages/tiff-4.0.3_2.txz
x packages/libcheck-0.9.12.txz
x packages/libXrandr-1.4.2_2.txz
x packages/python27-2.7.6_4.txz
x packages/clustalw-2.1_1.txz
x packages/libSM-1.2.2_2,1.txz
x packages/expat-2.1.0.txz
x packages/cmake-2.8.12.1_4.txz
x packages/gettext-0.18.3.1_1.txz
x packages/automake-wrapper-20131203.txz
x packages/freetype2-2.5.3_2.txz
x packages/libXft-2.3.1_2.txz
x packages/png-1.5.18.txz
x packages/libgcrypt-1.5.3_2.txz
x packages/python2-2_2.txz
x packages/xcmiscproto-1.2.2.txz
x packages/primer3-2.3.6.txz
x packages/libxml2-2.9.1_1.txz
x packages/damageproto-1.2.1.txz
x packages/libGL-7.6.1_4.txz
x packages/p5-Locale-gettext-1.05_3.txz
x packages/autoconf-wrapper-20131203.txz
x packages/perl5-5.16.3_10.txz
x packages/dri2proto-2.8.txz
x packages/glproto-1.4.17.txz
x packages/libICE-1.0.8_2,1.txz
x packages/emboss-6.2.0_3.txz
x packages/libXfixes-5.0.1_2.txz
x packages/libXi-1.7.2_2,1.txz
x packages/libXt-1.1.4_2,1.txz
x packages/jbigkit-1.6.txz
x packages/libXxf86vm-1.1.3_2.txz
x packages/printproto-1.0.5.txz
x packages/bison-2.7.1,1.txz
x packages/py27-libxml2-2.9.1.txz
x packages/fontconfig-2.11.0_3,1.txz
x packages/m4-1.4.17_1,1.txz
x packages/libXdmcp-1.1.1_2.txz
x packages/xf86vidmodeproto-2.3.1.txz
x packages/automake-1.14.txz
x packages/libXdamage-1.1.4_2.txz
x packages/libXp-1.0.2_2,1.txz
x packages/xextproto-7.3.0.txz
x packages/libxslt-1.1.28_3.txz
x packages/libXpm-3.5.11_2.txz
x packages/gmake-3.82_1.txz
x packages/pkgconf-0.9.5.txz
x packages/libXaw-1.0.12_2,2.txz
ELF ldconfig path: /lib /usr/lib /usr/lib/compat
Make depends
===>   embassy-6.2.0_2 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /buildshare/ports/355755/ports-mgmt/pkg
===>   Installing existing package /packages/pkg-1.2.7_2.txz
Installing pkg-1.2.7_2... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of embassy-6.2.0_2
===>   embassy-6.2.0_2 depends on shared library: libnucleus.so
 - not found
===>    Verifying for libnucleus.so in /buildshare/ports/355755/biology/emboss
===>   Installing existing package /packages/emboss-6.2.0_3.txz
Installing emboss-6.2.0_3...Installing libXpm-3.5.11_2...Installing libX11-1.6.2_2,1...Installing kbproto-1.0.6... done
Installing libXau-1.0.8_2...Installing xproto-7.0.25... done
 done
Installing libXdmcp-1.1.1_2... done
Installing libxcb-1.10_2...Installing libpthread-stubs-0.3_4... done
Installing libxml2-2.9.1_1... done
 done
 done
Installing libXext-1.3.2_2,1...Installing xextproto-7.3.0... done
 done
Installing libXt-1.1.4_2,1...Installing libSM-1.2.2_2,1...Installing libICE-1.0.8_2,1... done
 done
 done
 done
Installing open-motif-2.3.4_1...Installing jpeg-8_5... done
Installing libXaw-1.0.12_2,2...Installing libXmu-1.1.2_2,1... done
Installing libXp-1.0.2_2,1...Installing printproto-1.0.5... done
 done
 done
Installing libXft-2.3.1_2...Installing fontconfig-2.11.0_3,1...Installing expat-2.1.0... done
Installing freetype2-2.5.3_2... done
Running fc-cache to build fontconfig cache...
/usr/local/share/fonts: skipping, no such directory
/usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs
/usr/local/lib/X11/fonts/local: caching, new cache contents: 0 fonts, 0 dirs
/root/.local/share/fonts: skipping, no such directory
/root/.fonts: skipping, no such directory
/usr/local/share/fonts: skipping, no such directory
/usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs
/root/.local/share/fonts: skipping, no such directory
/root/.fonts: skipping, no such directory
/var/db/fontconfig: cleaning cache directory
/root/.cache/fontconfig: not cleaning non-existent cache directory
/root/.fontconfig: not cleaning non-existent cache directory
fc-cache: succeeded
 done
Installing libXrender-0.9.8_2...Installing renderproto-0.11.1... done
 done
 done
Installing png-1.5.18... done
Installing xbitmaps-1.1.1... done
 done
Installing libgd-2.1.0_3,1...Installing tiff-4.0.3_2...Installing freeglut-2.8.1_2...Installing libGLU-9.0.0...Installing libGL-7.6.1_4...Installing dri2proto-2.8... done
Installing libXdamage-1.1.4_2...Installing damageproto-1.2.1... done
Installing libXfixes-5.0.1_2...Installing fixesproto-5.0... done
 done
 done
Installing libXxf86vm-1.1.3_2...Installing xf86vidmodeproto-2.3.1... done
 done
Installing libdrm-2.4.17_1...Installing libpciaccess-0.13.2_2...Installing pciids-20140526... done
 done
 done
 done
 done
Installing libXi-1.7.2_2,1...Installing inputproto-2.3... done
 done
Installing libXrandr-1.4.2_2...Installing randrproto-1.4.0... done
 done
 done
Installing jbigkit-1.6... done
 done
 done
 done
Since FreeBSD has new USB stack, freeglut normally doesn't build on FreeBSD 8
(yet). To workaround this a small patch adds one include file and comments out
content of one function (only leaves return NULL).

This might cause side effects.  Joysticks do not work, and there might be ports
that do not compile or applications that crash because of this.

Do not hesitate to contact x11@FreeBSD.org if there are any issues and side
effects because of this.
=============================================================================

 The EMBOSS suite has been successfully installed under
 /usr/local/emboss

 To run EMBOSS programs make sure that /usr/local/emboss/bin is in your PATH.

 In order to see graphical output from some EMBOSS programs, you will 
 need to set the following environment variable in your shell:

 set PLPLOT_LIB to: "/usr/local/emboss/share/EMBOSS"

 A sample configuration file has been installed in
 /usr/local/emboss/share/EMBOSS/emboss.default.template

 This must be renamed to emboss.default and edited to suit your site 
 and requirements.

 A .embossrc file in a user's home directory overrides settings in the
 system-wide emboss.default.

 Additional third party applications for EMBOSS can be installed from the
 biology/embassy port. Remember, though that if you installed EMBOSS in a 
 PREFIX other than the default, you will have to install EMBASSY into this 
 same PREFIX.

=============================================================================
===>   Returning to build of embassy-6.2.0_2
===>   embassy-6.2.0_2 depends on shared library: libXm.so.4 - found (/usr/local/lib/libXm.so.4.0.4)
===>   embassy-6.2.0_2 depends on executable: gmake - not found
===>    Verifying install for gmake in /buildshare/ports/355755/devel/gmake
===>   Installing existing package /packages/gmake-3.82_1.txz
Installing gmake-3.82_1...Installing gettext-0.18.3.1_1... done
 done
===>   Returning to build of embassy-6.2.0_2
===>   embassy-6.2.0_2 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found
===>   embassy-6.2.0_2 depends on file: /usr/local/libdata/pkgconfig/xpm.pc - found
===>   embassy-6.2.0_2 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found
===>   embassy-6.2.0_2 depends on file: /usr/local/libdata/pkgconfig/xpm.pc - found
Make install
===>   embassy-6.2.0_2 depends on file: /usr/local/sbin/pkg - found
===> Fetching all distfiles required by embassy-6.2.0_2 for building
===>  Extracting for embassy-6.2.0_2
===>   embassy-6.2.0_2 depends on file: /usr/local/sbin/pkg - found
===> Fetching all distfiles required by embassy-6.2.0_2 for building
=> SHA256 Checksum OK for emboss/DOMAINATRIX-0.1.0.tar.gz.
=> SHA256 Checksum OK for emboss/EMNU-1.05.tar.gz.
=> SHA256 Checksum OK for emboss/ESIM4-1.0.0.tar.gz.
=> SHA256 Checksum OK for emboss/HMMER-2.3.2.tar.gz.
=> SHA256 Checksum OK for emboss/MEMENEW-4.0.0.tar.gz.
=> SHA256 Checksum OK for emboss/MSE-3.0.0.tar.gz.
=> SHA256 Checksum OK for emboss/PHYLIPNEW-3.69.tar.gz.
=> SHA256 Checksum OK for emboss/TOPO-2.0.0.tar.gz.
=> SHA256 Checksum OK for emboss/DOMALIGN-0.1.0.tar.gz.
=> SHA256 Checksum OK for emboss/DOMSEARCH-0.1.0.tar.gz.
=> SHA256 Checksum OK for emboss/SIGNATURE-0.1.0.tar.gz.
=> SHA256 Checksum OK for emboss/STRUCTURE-0.1.0.tar.gz.
=> SHA256 Checksum OK for emboss/MYEMBOSS-6.2.0.tar.gz.
=> SHA256 Checksum OK for emboss/VIENNA-1.7.2.tar.gz.
=> SHA256 Checksum OK for emboss/MIRA-2.8.2.tar.gz.
=> SHA256 Checksum OK for emboss/IPRSCAN-4.3.1.tar.gz.
=> SHA256 Checksum OK for emboss/CBSTOOLS-1.0.0.tar.gz.
===>  Patching for embassy-6.2.0_2
===>   embassy-6.2.0_2 depends on executable: gmake - found
===>   embassy-6.2.0_2 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found
===>   embassy-6.2.0_2 depends on file: /usr/local/libdata/pkgconfig/xpm.pc - found
===>   embassy-6.2.0_2 depends on shared library: libnucleus.so
 - not found
===>    Verifying for libnucleus.so in /buildshare/ports/355755/biology/emboss
===>   Installing existing package /packages/emboss-6.2.0_3.txz
Installing emboss-6.2.0_3...emboss-6.2.0_3 already installed

Failed to install the following 1 package(s): /packages/emboss-6.2.0_3.txz
*** Error code 70

Stop.
make[1]: stopped in /buildshare/ports/355755/biology/embassy
*** Error code 1

Stop.
make: stopped in /buildshare/ports/355755/biology/embassy