Bio::Blat::Report::SeqDesc stores sequence information of query or subject of the BLAT report. It also includes some hit information.
sequences of segments. Returns an array of String. Returns nil if there are no sequence data.
Creates a new SeqDesc object. It is designed to be called internally from Bio::Blat::Report class. Users shall not use it directly.
# File lib/bio/appl/blat/report.rb, line 161 def initialize(gap_count, gap_bases, name, size, st, ed, starts, seqs) @gap_count = gap_count.to_i @gap_bases = gap_bases.to_i @name = name @size = size.to_i @start = st.to_i @end = ed.to_i @starts = starts.collect { |x| x.to_i } @seqs = seqs end
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