build started at Sun Mar 31 21:18:53 WEST 2024 port directory: /usr/ports/biology/migrate package name: migrate-5.0.6 building for: FreeBSD 15amd64-main 15.0-CURRENT FreeBSD 15.0-CURRENT 1500017 amd64 maintained by: eduardo@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 1001 1001 2086 Mar 31 20:18 /usr/ports/biology/migrate/Makefile Poudriere version: poudriere-git-3.4.1_1 Host OSVERSION: 1500017 Jail OSVERSION: 1500017 Job Id: ---Begin Environment--- SHELL=/bin/sh OSVERSION=1500017 UNAME_v=FreeBSD 15.0-CURRENT 1500017 UNAME_r=15.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git TRYBROKEN=yes LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.1_1 MASTERMNT=/usr/local/poudriere/data/.m/15amd64-main/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=st-256color GID=0 OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 UID=0 PWD=/usr/local/poudriere/data/.m/15amd64-main/ref/.p OUTPUT_REDIRECTED_STDOUT=3 NO_WARNING_PKG_INSTALL_EOL=yes P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=15amd64-main SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=testport.sh OLDPWD=/usr/local/poudriere/data/.m/15amd64-main/ref/.p POUDRIERE_PKGNAME=poudriere-git-3.4.1_1 SCRIPTPATH=/usr/local/share/poudriere/testport.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV=PACKAGES=/tmp/pkgs PKGREPOSITORY=/tmp/pkgs PKGLATESTREPOSITORY=/tmp/pkgs/Latest FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for migrate-5.0.6: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples THREAD=on: Build with THREAD support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- eduardo@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- ac_cv_prog_GMAKE="/usr/bin/make" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/migrate/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/migrate/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/migrate/work/.cache HOME=/wrkdirs/usr/ports/biology/migrate/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/migrate/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/migrate/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/migrate/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/migrate/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/migrate/work/.cache HOME=/wrkdirs/usr/ports/biology/migrate/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/migrate/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/migrate/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/migrate" EXAMPLESDIR="share/examples/migrate" DATADIR="share/migrate" WWWDIR="www/migrate" ETCDIR="etc/migrate" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/migrate DOCSDIR=/usr/local/share/doc/migrate EXAMPLESDIR=/usr/local/share/examples/migrate WWWDIR=/usr/local/www/migrate ETCDIR=/usr/local/etc/migrate --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### Misc Poudriere #### .include "/etc/make.conf.ports_env" ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 19458 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: DEVELOPER_MODE=yes DEVELOPER=1 STRICT_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> License MIT accepted by the user =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> migrate-5.0.6 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.20.9_1.pkg [15amd64-main] Installing pkg-1.20.9_1... [15amd64-main] Extracting pkg-1.20.9_1: .......... done ===> migrate-5.0.6 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of migrate-5.0.6 =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes STRICT_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> migrate-5.0.6 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by migrate-5.0.6 for building =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes STRICT_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> migrate-5.0.6 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by migrate-5.0.6 for building => SHA256 Checksum OK for migrate-5.0.6.src.tar.gz. =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes STRICT_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> License MIT accepted by the user ===> migrate-5.0.6 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by migrate-5.0.6 for building ===> Extracting for migrate-5.0.6 => SHA256 Checksum OK for migrate-5.0.6.src.tar.gz. =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes DEVELOPER=1 STRICT_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Patching for migrate-5.0.6 ===> Applying FreeBSD patches for migrate-5.0.6 from /usr/ports/biology/migrate/files =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =>> Recording filesystem state for prebuild... done =================================================== ===== env: DEVELOPER_MODE=yes STRICT_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Configuring for migrate-5.0.6 configure: loading site script /usr/ports/Templates/config.site checking build system type... amd64-portbld-freebsd15.0 checking host system type... amd64-portbld-freebsd15.0 checking target system type... amd64-portbld-freebsd15.0 ./configure: USERFLAGS+=-O2: not found checking for gmake... (cached) /usr/bin/make checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether cc accepts -g... yes checking for cc option to enable C11 features... none needed checking whether the compiler supports GNU C++... yes checking whether c++ accepts -g... yes checking for c++ option to enable C++11 features... none needed ./configure: CFLAGS+=: not found C-compiler: cc C++-compiler:c++ CFLAGS: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing ======================================================================= checking for a BSD-compatible install... /usr/bin/install -c checking for pthread_create in -lpthread... yes checking for MPI_Init in -lmpi... no checking for exp in -lm... yes checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for limits.h... (cached) yes checking for strings.h... (cached) yes checking for pthread.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... (cached) yes checking for int... (cached) yes checking whether struct tm is in sys/time.h or time.h... time.h checking for inline... inline checking for strftime... (cached) yes checking for strcspn... (cached) yes checking for strsep... (cached) yes checking for strdup... (cached) yes checking for lgamma... yes checking which zlib implementation to use... autodetect checking for main in -lz... yes checking for gzbuffer... no ./configure: =no: not found configure: creating ./config.status config.status: creating Makefile config.status: creating src/conf.h ======================================================================= Migrate subversion: March-30-2024 Hardware: portbld System OS: freebsd15.0 FreeBSD freebsd15.0 System CPU: amd64 ----------------------------------------------------------------------- MIGRATE-N is now setup to compile the program you need to type one of the commands below (ordered by preference): SINGLE CPU machines make # with PDF output support # this might fail on first attempt, # if the make fails, please let me know # often linking fails because the C++ pdf library # and the core migrate parts (C) mismatch # check the Makefile line for STDLIB= -lstdc++ SMP machines more than 1 CPU in machine make thread # try this but I have not tested in a while needs pthreads make # on macs running MacOS using GrandCentral PARALLEL Computers, Clusters with MPI software such as openmpi or mpich2 make clean # to make sure that no single-CPU object is available make mpis # each cpu-core can be treated as a node ------------------------------------------------------------------------ In case there are problems with the compile send a message to the migrate-support@google.com usergroup, include a log of ./configure make ======================================================================= =========================================================================== =================================================== ===== env: DEVELOPER_MODE=yes STRICT_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Building for migrate-5.0.6 Create the PDF library (libharu 1.x): [linker warnings are OK] Using system zlib architecture Compile the main source files and create the threaded executable `migrate-n' is up to date. =========================================================================== =>> Checking for filesystem violations... done =================================================== ===== env: DEVELOPER_MODE=yes USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =>> Recording filesystem state for prestage... done =================================================== ===== env: DEVELOPER_MODE=yes STRICT_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Staging for migrate-5.0.6 ===> Generating temporary packing list install -s -m 555 /wrkdirs/usr/ports/biology/migrate/work/migrate-5.0.6/src/migrate-n /wrkdirs/usr/ports/biology/migrate/work/stage/usr/local/bin strip: file format not recognized strip: file format not recognized install: strip command strip failed on /wrkdirs/usr/ports/biology/migrate/work/stage/usr/local/bin/migrate-n *** Error code 70 Stop. make: stopped in /usr/ports/biology/migrate