building octave-forge-ga-0.9.6 in directory /usr/local/tinderbox/6-FreeBSD-NativePorts build started at Sun May 24 08:52:13 UTC 2009 port directory: /usr/ports/math/octave-forge-ga building for: 6.4-STABLE i386 maintained by: stephen@missouri.edu Makefile ident: $FreeBSD: ports/math/octave-forge-ga/Makefile,v 1.3 2009/04/05 20:50:40 dhn Exp $ prefixes: LOCALBASE=usr/local X11BASE=usr/local PREFIX=/usr/local Begin Configuration: ---Begin Environment--- ARCH=i386 PACKAGE_BUILDING=1 USER=root CCACHE_DIR=/ccache BRANCH=STABLE CCACHE_NOLINK=1 HOST_WORKDIR= X11BASE=/usr/local BATCH=1 OLDPWD=/ HOME=/root PAGER=more SRCBASE=/usr/local/tinderbox/jails/6/src PKGZIPCMD=bzip2 HAVE_MOTIF=1 FTP_TIMEOUT=900 HTTP_TIMEOUT=900 defaultUpdateHost=miwibox.org pb=/usr/local/tinderbox DISTFILE_CACHE=/usr/ports/distfiles OSREL=6.4 defaultUpdateType=CSUP BLOCKSIZE=K TINDERD_LOGFILE=/dev/null PORTOBJFORMAT=elf WRKDIRPREFIX=/work DISTDIR=/tmp/distfiles DISTCACHE=/distcache CCACHE_LOGFILE= PATH=/opt:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/local/bin PACKAGES=/tmp/packages TIMEOUT=7200 PKGSUFFIX=.tbz OSVERSION=604100 OPTIONS_ENABLED=1 __DSVERSION__=3.2 TINDERD_SLEEPTIME=120 UNAME_n=tinderbox.host __MKLVL__=1 CCACHE_JAIL=0 LOCALBASE=/usr/local PORT_DBDIR=/var/db/ports CCACHE_MAX_SIZE=2G DISTFILE_URI= X_WINDOW_SYSTEM=xorg MASTER_SITE_OVERRIDE=file:///distcache/${DIST_SUBDIR}/ OPTIONS_DIR=/options UNAME_r=6.4-STABLE USA_RESIDENT=YES UNAME_s=FreeBSD PARALLEL_PACKAGE_BUILD=1 PWD=/usr/ports/math/octave-forge-ga UNAME_v=FreeBSD 6.4-STABLE #0: Sun May 24 10:31:08 CEST 2009 root@tinderbox.host:/usr/src/sys/magic/kernel/path FTP_PASSIVE_MODE=yes CCACHE_ENABLED=1 EDITOR=vi INDEXFILE=INDEX-6 ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- End Configuration. FETCH_DEPENDS= PATCH_DEPENDS= EXTRACT_DEPENDS= BUILD_DEPENDS=fftw3-3.1.3.tbz glpk-4.37.tbz hdf5-1.6.8_1.tbz suitesparse-3.3.0.tbz qhull-1.0_1.tbz blas-1.0_3.tbz lapack-3.2.1.tbz gnuplot-4.2.4.tbz gsed-4.1.5_1.tbz gcc-4.3.4_20090503.tbz pkg-config-0.23_1.tbz libgmp-4.2.4.tbz gd-2.0.35,1.tbz pdflib-7.0.3.tbz plotutils-2.5,1.tbz libX11-1.2.1,1.tbz libXaw-1.0.5_1,1.tbz libXmu-1.0.4,1.tbz libXt-1.0.5_1.tbz libXext-1.0.5,1.tbz mpfr-2.4.1.tbz libiconv-1.11_1.tbz jpeg-6b_7.tbz png-1.2.35.tbz freetype2-2.3.9_1.tbz open-motif-2.2.3_6.tbz libXpm-3.5.7.tbz libxcb-1.2_1.tbz kbproto-1.0.3.tbz libXau-1.0.4.tbz libXdmcp-1.0.2_1.tbz xproto-7.0.15.tbz printproto-1.0.4.tbz libXp-1.0.0,1.tbz libSM-1.1.0_1,1.tbz xextproto-7.0.5.tbz xbitmaps-1.0.1.tbz xcb-proto-1.4.tbz libpthread-stubs-0.1.tbz python25-2.5.4_1.tbz libICE-1.0.4_1,1.tbz octave-3.0.5_1.tbz gettext-0.17_1.tbz gmake-3.81_3.tbz pcre-7.9.tbz RUN_DEPENDS=pcre-7.9.tbz octave-forge-signal-1.0.9.tbz octave-3.0.5_1.tbz octave-forge-base-1.0_1.tbz gcc-4.3.4_20090503.tbz octave-forge-optim-1.0.5.tbz octave-forge-specfun-1.0.8.tbz fftw3-3.1.3.tbz glpk-4.37.tbz hdf5-1.6.8_1.tbz suitesparse-3.3.0.tbz qhull-1.0_1.tbz blas-1.0_3.tbz lapack-3.2.1.tbz gnuplot-4.2.4.tbz gsed-4.1.5_1.tbz libgmp-4.2.4.tbz mpfr-2.4.1.tbz libiconv-1.11_1.tbz octave-forge-miscellaneous-1.0.8.tbz pkg-config-0.23_1.tbz gd-2.0.35,1.tbz pdflib-7.0.3.tbz plotutils-2.5,1.tbz libX11-1.2.1,1.tbz libXaw-1.0.5_1,1.tbz libXmu-1.0.4,1.tbz libXt-1.0.5_1.tbz libXext-1.0.5,1.tbz jpeg-6b_7.tbz png-1.2.35.tbz freetype2-2.3.9_1.tbz open-motif-2.2.3_6.tbz libXpm-3.5.7.tbz libxcb-1.2_1.tbz kbproto-1.0.3.tbz libXau-1.0.4.tbz libXdmcp-1.0.2_1.tbz xproto-7.0.15.tbz printproto-1.0.4.tbz libXp-1.0.0,1.tbz libSM-1.1.0_1,1.tbz xextproto-7.0.5.tbz xbitmaps-1.0.1.tbz xcb-proto-1.4.tbz libpthread-stubs-0.1.tbz python25-2.5.4_1.tbz libICE-1.0.4_1,1.tbz octave-forge-communications-1.0.8.tbz add_pkg ================================================================ ======================================== => ga-0.9.6.tar.gz doesn't seem to exist in /tmp/distfiles/octave-forge. => Attempting to fetch from file:///distcache/octave-forge/. ga-0.9.6.tar.gz 19 kB 786 kBps => MD5 Checksum OK for octave-forge/ga-0.9.6.tar.gz. => SHA256 Checksum OK for octave-forge/ga-0.9.6.tar.gz. ================================================================ ======================================== add_pkg ===> Extracting for octave-forge-ga-0.9.6 => MD5 Checksum OK for octave-forge/ga-0.9.6.tar.gz. => SHA256 Checksum OK for octave-forge/ga-0.9.6.tar.gz. ================================================================ ======================================== add_pkg ===> Patching for octave-forge-ga-0.9.6 ================================================================ ======================================== add_pkg fftw3-3.1.3.tbz glpk-4.37.tbz hdf5-1.6.8_1.tbz suitesparse-3.3.0.tbz qhull-1.0_1.tbz blas-1.0_3.tbz lapack-3.2.1.tbz gnuplot-4.2.4.tbz gsed-4.1.5_1.tbz gcc-4.3.4_20090503.tbz pkg-config-0.23_1.tbz libgmp-4.2.4.tbz gd-2.0.35,1.tbz pdflib-7.0.3.tbz plotutils-2.5,1.tbz libX11-1.2.1,1.tbz libXaw-1.0.5_1,1.tbz libXmu-1.0.4,1.tbz libXt-1.0.5_1.tbz libXext-1.0.5,1.tbz mpfr-2.4.1.tbz libiconv-1.11_1.tbz jpeg-6b_7.tbz png-1.2.35.tbz freetype2-2.3.9_1.tbz open-motif-2.2.3_6.tbz libXpm-3.5.7.tbz libxcb-1.2_1.tbz kbproto-1.0.3.tbz libXau-1.0.4.tbz libXdmcp-1.0.2_1.tbz xproto-7.0.15.tbz printproto-1.0.4.tbz libXp-1.0.0,1.tbz libSM-1.1.0_1,1.tbz xextproto-7.0.5.tbz xbitmaps-1.0.1.tbz xcb-proto-1.4.tbz libpthread-stubs-0.1.tbz python25-2.5.4_1.tbz libICE-1.0.4_1,1.tbz octave-3.0.5_1.tbz gettext-0.17_1.tbz gmake-3.81_3.tbz pcre-7.9.tbz adding dependencies pkg_add fftw3-3.1.3.tbz pkg_add glpk-4.37.tbz pkg_add hdf5-1.6.8_1.tbz pkg_add suitesparse-3.3.0.tbz pkg_add qhull-1.0_1.tbz pkg_add blas-1.0_3.tbz skipping blas-1.0_3, already added pkg_add lapack-3.2.1.tbz skipping lapack-3.2.1, already added pkg_add gnuplot-4.2.4.tbz ==== Note that some of the standard modules are provided as separate ports since they require extra dependencies: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Install them as needed. ==== ***************************************************************** Although libxcb can yield dramatic improvements in speed, memory footprint, and responsiveness, and will probably become the default Xlib for X.org/freedesktop.org, it is still experimental software. Some broken callers will abort() on locking assertion failures. As a temporary workaround, set LIBXCB_ALLOW_SLOPPY_LOCK in your environment to skip the abort(). This may result in noisy stacktrace printing. ***************************************************************** pkg_add gsed-4.1.5_1.tbz pkg_add gcc-4.3.4_20090503.tbz skipping gcc-4.3.4_20090503, already added pkg_add pkg-config-0.23_1.tbz skipping pkg-config-0.23_1, already added pkg_add libgmp-4.2.4.tbz skipping libgmp-4.2.4, already added pkg_add gd-2.0.35,1.tbz skipping gd-2.0.35,1, already added pkg_add pdflib-7.0.3.tbz skipping pdflib-7.0.3, already added pkg_add plotutils-2.5,1.tbz skipping plotutils-2.5,1, already added pkg_add libX11-1.2.1,1.tbz skipping libX11-1.2.1,1, already added pkg_add libXaw-1.0.5_1,1.tbz skipping libXaw-1.0.5_1,1, already added pkg_add libXmu-1.0.4,1.tbz skipping libXmu-1.0.4,1, already added pkg_add libXt-1.0.5_1.tbz skipping libXt-1.0.5_1, already added pkg_add libXext-1.0.5,1.tbz skipping libXext-1.0.5,1, already added pkg_add mpfr-2.4.1.tbz skipping mpfr-2.4.1, already added pkg_add libiconv-1.11_1.tbz skipping libiconv-1.11_1, already added pkg_add jpeg-6b_7.tbz skipping jpeg-6b_7, already added pkg_add png-1.2.35.tbz skipping png-1.2.35, already added pkg_add freetype2-2.3.9_1.tbz skipping freetype2-2.3.9_1, already added pkg_add open-motif-2.2.3_6.tbz skipping open-motif-2.2.3_6, already added pkg_add libXpm-3.5.7.tbz skipping libXpm-3.5.7, already added pkg_add libxcb-1.2_1.tbz skipping libxcb-1.2_1, already added pkg_add kbproto-1.0.3.tbz skipping kbproto-1.0.3, already added pkg_add libXau-1.0.4.tbz skipping libXau-1.0.4, already added pkg_add libXdmcp-1.0.2_1.tbz skipping libXdmcp-1.0.2_1, already added pkg_add xproto-7.0.15.tbz skipping xproto-7.0.15, already added pkg_add printproto-1.0.4.tbz skipping printproto-1.0.4, already added pkg_add libXp-1.0.0,1.tbz skipping libXp-1.0.0,1, already added pkg_add libSM-1.1.0_1,1.tbz skipping libSM-1.1.0_1,1, already added pkg_add xextproto-7.0.5.tbz skipping xextproto-7.0.5, already added pkg_add xbitmaps-1.0.1.tbz skipping xbitmaps-1.0.1, already added pkg_add xcb-proto-1.4.tbz skipping xcb-proto-1.4, already added pkg_add libpthread-stubs-0.1.tbz skipping libpthread-stubs-0.1, already added pkg_add python25-2.5.4_1.tbz skipping python25-2.5.4_1, already added pkg_add libICE-1.0.4_1,1.tbz skipping libICE-1.0.4_1,1, already added pkg_add octave-3.0.5_1.tbz pkg_add gettext-0.17_1.tbz pkg_add gmake-3.81_3.tbz pkg_add pcre-7.9.tbz ===> octave-forge-ga-0.9.6 depends on executable: octave - found ===> octave-forge-ga-0.9.6 depends on executable: gmake - found ===> octave-forge-ga-0.9.6 depends on executable: gfortran43 - found ===> octave-forge-ga-0.9.6 depends on shared library: pcre - found ===> Configuring for octave-forge-ga-0.9.6 ===> Building for octave-forge-ga-0.9.6 ================================================================ ======================================== make: don't know how to make regression-test(continuing) ================================================================ ======================================== add_pkg pcre-7.9.tbz octave-forge-signal-1.0.9.tbz octave-3.0.5_1.tbz octave-forge-base-1.0_1.tbz gcc-4.3.4_20090503.tbz octave-forge-optim-1.0.5.tbz octave-forge-specfun-1.0.8.tbz fftw3-3.1.3.tbz glpk-4.37.tbz hdf5-1.6.8_1.tbz suitesparse-3.3.0.tbz qhull-1.0_1.tbz blas-1.0_3.tbz lapack-3.2.1.tbz gnuplot-4.2.4.tbz gsed-4.1.5_1.tbz libgmp-4.2.4.tbz mpfr-2.4.1.tbz libiconv-1.11_1.tbz octave-forge-miscellaneous-1.0.8.tbz pkg-config-0.23_1.tbz gd-2.0.35,1.tbz pdflib-7.0.3.tbz plotutils-2.5,1.tbz libX11-1.2.1,1.tbz libXaw-1.0.5_1,1.tbz libXmu-1.0.4,1.tbz libXt-1.0.5_1.tbz libXext-1.0.5,1.tbz jpeg-6b_7.tbz png-1.2.35.tbz freetype2-2.3.9_1.tbz open-motif-2.2.3_6.tbz libXpm-3.5.7.tbz libxcb-1.2_1.tbz kbproto-1.0.3.tbz libXau-1.0.4.tbz libXdmcp-1.0.2_1.tbz xproto-7.0.15.tbz printproto-1.0.4.tbz libXp-1.0.0,1.tbz libSM-1.1.0_1,1.tbz xextproto-7.0.5.tbz xbitmaps-1.0.1.tbz xcb-proto-1.4.tbz libpthread-stubs-0.1.tbz python25-2.5.4_1.tbz libICE-1.0.4_1,1.tbz octave-forge-communications-1.0.8.tbz adding dependencies pkg_add pcre-7.9.tbz skipping pcre-7.9, already added pkg_add octave-forge-signal-1.0.9.tbz warning: implicit conversion from matrix to string warning: implicit conversion from matrix to string warning: implicit conversion from matrix to string warning: implicit conversion from matrix to string pkg_add octave-3.0.5_1.tbz skipping octave-3.0.5_1, already added pkg_add octave-forge-base-1.0_1.tbz skipping octave-forge-base-1.0_1, already added pkg_add gcc-4.3.4_20090503.tbz skipping gcc-4.3.4_20090503, already added pkg_add octave-forge-optim-1.0.5.tbz skipping octave-forge-optim-1.0.5, already added pkg_add octave-forge-specfun-1.0.8.tbz skipping octave-forge-specfun-1.0.8, already added pkg_add fftw3-3.1.3.tbz skipping fftw3-3.1.3, already added pkg_add glpk-4.37.tbz skipping glpk-4.37, already added pkg_add hdf5-1.6.8_1.tbz skipping hdf5-1.6.8_1, already added pkg_add suitesparse-3.3.0.tbz skipping suitesparse-3.3.0, already added pkg_add qhull-1.0_1.tbz skipping qhull-1.0_1, already added pkg_add blas-1.0_3.tbz skipping blas-1.0_3, already added pkg_add lapack-3.2.1.tbz skipping lapack-3.2.1, already added pkg_add gnuplot-4.2.4.tbz skipping gnuplot-4.2.4, already added pkg_add gsed-4.1.5_1.tbz skipping gsed-4.1.5_1, already added pkg_add libgmp-4.2.4.tbz skipping libgmp-4.2.4, already added pkg_add mpfr-2.4.1.tbz skipping mpfr-2.4.1, already added pkg_add libiconv-1.11_1.tbz skipping libiconv-1.11_1, already added pkg_add octave-forge-miscellaneous-1.0.8.tbz skipping octave-forge-miscellaneous-1.0.8, already added pkg_add pkg-config-0.23_1.tbz skipping pkg-config-0.23_1, already added pkg_add gd-2.0.35,1.tbz skipping gd-2.0.35,1, already added pkg_add pdflib-7.0.3.tbz skipping pdflib-7.0.3, already added pkg_add plotutils-2.5,1.tbz skipping plotutils-2.5,1, already added pkg_add libX11-1.2.1,1.tbz skipping libX11-1.2.1,1, already added pkg_add libXaw-1.0.5_1,1.tbz skipping libXaw-1.0.5_1,1, already added pkg_add libXmu-1.0.4,1.tbz skipping libXmu-1.0.4,1, already added pkg_add libXt-1.0.5_1.tbz skipping libXt-1.0.5_1, already added pkg_add libXext-1.0.5,1.tbz skipping libXext-1.0.5,1, already added pkg_add jpeg-6b_7.tbz skipping jpeg-6b_7, already added pkg_add png-1.2.35.tbz skipping png-1.2.35, already added pkg_add freetype2-2.3.9_1.tbz skipping freetype2-2.3.9_1, already added pkg_add open-motif-2.2.3_6.tbz skipping open-motif-2.2.3_6, already added pkg_add libXpm-3.5.7.tbz skipping libXpm-3.5.7, already added pkg_add libxcb-1.2_1.tbz skipping libxcb-1.2_1, already added pkg_add kbproto-1.0.3.tbz skipping kbproto-1.0.3, already added pkg_add libXau-1.0.4.tbz skipping libXau-1.0.4, already added pkg_add libXdmcp-1.0.2_1.tbz skipping libXdmcp-1.0.2_1, already added pkg_add xproto-7.0.15.tbz skipping xproto-7.0.15, already added pkg_add printproto-1.0.4.tbz skipping printproto-1.0.4, already added pkg_add libXp-1.0.0,1.tbz skipping libXp-1.0.0,1, already added pkg_add libSM-1.1.0_1,1.tbz skipping libSM-1.1.0_1,1, already added pkg_add xextproto-7.0.5.tbz skipping xextproto-7.0.5, already added pkg_add xbitmaps-1.0.1.tbz skipping xbitmaps-1.0.1, already added pkg_add xcb-proto-1.4.tbz skipping xcb-proto-1.4, already added pkg_add libpthread-stubs-0.1.tbz skipping libpthread-stubs-0.1, already added pkg_add python25-2.5.4_1.tbz skipping python25-2.5.4_1, already added pkg_add libICE-1.0.4_1,1.tbz skipping libICE-1.0.4_1,1, already added pkg_add octave-forge-communications-1.0.8.tbz octave-3.0.5 in malloc(): error: recursive call panic: Abort trap: 6 -- stopping myself... octave-3.0.5 in malloc(): error: recursive call panic: attempted clean up apparently failed -- aborting... Abort trap (core dumped) pkg_add: command 'octave -H -q --no-site-file --eval "pkg('install','/usr/local/share/octave/tarballs/communications-1.0.8.tar.gz')" > /dev/null' failed ===> Installing for octave-forge-ga-0.9.6 ===> octave-forge-ga-0.9.6 depends on file: /usr/local/share/octave/tarballs/communications.tar.gz - found ===> octave-forge-ga-0.9.6 depends on executable: octave - found ===> octave-forge-ga-0.9.6 depends on file: /usr/local/share/octave/tarballs - found ===> octave-forge-ga-0.9.6 depends on executable: gfortran43 - found ===> octave-forge-ga-0.9.6 depends on shared library: pcre - found ===> Generating temporary packing list ===> Checking if math/octave-forge-ga already installed /bin/mkdir -p /usr/local/share/octave/tarballs install -o root -g wheel -m 444 /work/a/ports/math/octave-forge-ga/work/ga-0.9.6.tar.gz /usr/local/share/octave/tarballs/. /bin/rm -f /usr/local/share/octave/tarballs/ga.tar.gz octave -H -q --no-site-file --eval "pkg('install','/usr/local/share/octave/tarballs/ga-0.9.6.tar.gz')" error: the following dependencies where unsatisfied: ga needs communications >= 1.0.0 *** Error code 1 Stop in /a/ports/math/octave-forge-ga. ================================================================ build of /usr/ports/math/octave-forge-ga ended at Sun May 24 08:54:20 UTC 2009